Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0811 ATGAGGGTGAGTTACCCTCGTTTCTTCTTATTCCTTCTGCTCCTTGCTGTCTTTTGCTTTGCCTCCTTTGCTTCTGGAGCCACTCTGCCCCAAGATGAAGTGAAAGCTCTGGAAGATATAGCTAAGATACTTGGGAAGAAGGACTGGGATTTCAGCGTGGATCCATGCAGTAAAGAACGAAATTGGACATCTGCAGTACAAGTAAAAGGGAGTGAAAATGAAGTAAGATGCAATTGCGACTACAACAATGGCACCGTTTGTCATGTCACCAACATAATTTTGAAAGCACAAAATCTCCCAGGCACCCTCCCACAAGATCTGTTCAGATTGCCTTACCTACAAGAAATTGACCTTACTCGCAATTACCTGAACGGTACAATTCCTAAAGAATGGGGCTCCACGAAACTTCTCAACATTTCCCTCCTTGGAAATCGATTAACGGGCTCAATACCAAAAGAGATAGCAAACATATCCACTCTTCAAAGTTTTGTCGTGGAGGCCAATCAACTATCTGGAGATCTTCCTCCTGAGCTTGGGGATCTACCCCAAATTCAAAGACTGCTACTTTCCTCCAACAATTTTACAGGAGAGTTACCTGAAACATTGGCCAAGATCACTACATTGCAGGATATTCGAATTGGGGACAATCAGTTTTCTGGGAAGATACCTGATTTTATTCAAAGTTTGACAAGTCTCCAAAAGCTAGTTATTCAAGGGAGTGGATTAAATGGGCCTATTCCTTCTGGAATTTCACTTCTGAAAAACTTAACTGACTTGAGAATTAGTGATCTGAATGGATCTGAACATTCACCTTTTCCACAACTTAATAACATGACGTTAAAATATCTGATTTTGAGGAATTGCAACATTAATGGAACCCTACCAATATATCTTGGTTCAATGACAACCTTGAAAAACTTAGACCTCAGCTTTAACAAATTGACTGGACCAATTCCGAGTAACTATGATGCCCTAAGAAAAGTCGATTACATATATTTAACTGGAAATCTTCTCAATGGACCAGTACCTGCATGGACAGAGAAAGCTGATAATGTAGATATTTCATATAACAACTTCAGCATCACAAGCCAAGGGAGTAGTACATGTCAAAATGGAAAAGTGAACTTGTTTTCTAGCTCCACAACGCATAATGACTCAGGAACAGTTGCTTGCTTGGGAAGCAATGTCTGTCAAAAAAGCTCATACTCCCTTCATATAAATTGTGGTGGAAAGATGGTAACAGAGGGCAGAAGCACATATGATGATGATTTAGATAATGGAGGTCCAGCTAGATTTCACCGAAGTGGAACAAAAAATTGGGCATTTGTCACTACTGGTAACTTCATGGATAATGATGATGCTGGCGACTACTCTATCTCGCAAAATAAATCATCGCTTTCTATGGACAATGCTGACCTCTACATGGATGCACGAGTTTCTCCCACTTCTCTAACGTATTATGGATTTTGCTTGGGAAAAGGAAACTACACAGTTCATCTACATTTTGCAGACATCATGTTTACTAATGATCAAACATTTAACAGCTTAGGAAGACGAGTATTTGACATCTATATTCAGGGAGAGCTAGTGCAGAAAGACTTCAATATTGTAGAAGAAGCGGGAGGAATTGATAAAGCAATCATAAAAAACTTCACTGCTGTTGTGAGTAGTAATACCTTGGAGATACGTTTGTATTGGGCTGGAAAAGGGACAACTAGTCTCCCATTTAGATCAGTATATGGTCCTCTTATATCAGCTATATCTGTGGAACCTAACTTTACACCACCCTCAGAAAATGGAAGTAGCATATCTGTAGGAGCTGTGGTTGGAATTGTGGTTGCAGGAGTAATTGTTATCATCCTTGTACTTGGCATTCTTTGGTGGAAAGGATGTCTAGGAAAGAAAAGTTCTTTAGAAAGAGAGCTAAAGGGTTTAGACCTGAGAACTGGTGTGTTTCCTTTAAGAGAAATCAAAGTAGCGACAAACAACTTTGATGTTGCAAATAAGATTGGAGAAGGAGGATTTGGTCCTGTGTACAAGGGAAGTCTATCAGATGGAACACTGATAGCAGTGAAGCAACTTTCTTCTAAATCAAAACAAGGAAATCGTGAGTTTTTAAATGAGATAGGCATGATTTCTGCTTTGCAACATCCTTATCTTGTTAAACTTTATGGATGTTGTGTGGAGGGAGATCAACTATTACTGGTATATGAATATATGGAAAACAATAGCCTTGCTCGTGCTTTATTTGGACCTGAAGAACACCAAATAAGATTGGATTGGCCAACAAGATACAAGATTTGTATTGGTATTGCTAGAGGTTTGGCATACCTCCATGAAGAATCAAGATTAAAGGTTGTTCATAGAGACATTAAGACCACTAATGTGTTGCTTGATAAAGATCTCAATCCAAAAATATCTGACTTTGGTTTGGCCAAACTGGATGAGGAAGAAAATACACATATTAGCACCCGCATAGCTGGAACATATGGATATATGGCTCCAGAATATGCCATGCATGGTTATTTGACTGATAAAGCAGATGTCTATAGTTTTGGAATTGTTGTCTTAGAAATCATAAATGGAAGGAACAATACCATTCACCGTCCTAAAGAACAATCATTCTCCATTCTTGAATGGGCACATCTGCTGAAAGAGAATGGAGATCTAATGGACCTAGTTGATAGAAGATTGGGTTCAAACTTCAACAAAGAGGAGGTGTTAGTGTTGATAAAAGTGGCTCTCTTATGCACTAATGTTACTACAACAGTTAGGCCAAGCATGTCATCAGTGGTAAGCATTCTAGAAGGAAGAACATTTGTTGAGGAAGTGTTTTCAGAGGCAAGTGATGTGGAAGAGAAGAAGTTAGAGAAAATGAGACAATACTACCAAGAGTTGAGTATCTCAAAGGATGAGCCATGGACTTCCTCATCTACTTCTGCAGCAGATCTTTATCCTTTAACCCTGGATTCTTCTTACTTGCAGAAGAGAGGCTAG 2997 0.3917 MRVSYPRFFLFLLLLAVFCFASFASGATLPQDEVKALEDIAKILGKKDWDFSVDPCSKERNWTSAVQVKGSENEVRCNCDYNNGTVCHVTNIILKAQNLPGTLPQDLFRLPYLQEIDLTRNYLNGTIPKEWGSTKLLNISLLGNRLTGSIPKEIANISTLQSFVVEANQLSGDLPPELGDLPQIQRLLLSSNNFTGELPETLAKITTLQDIRIGDNQFSGKIPDFIQSLTSLQKLVIQGSGLNGPIPSGISLLKNLTDLRISDLNGSEHSPFPQLNNMTLKYLILRNCNINGTLPIYLGSMTTLKNLDLSFNKLTGPIPSNYDALRKVDYIYLTGNLLNGPVPAWTEKADNVDISYNNFSITSQGSSTCQNGKVNLFSSSTTHNDSGTVACLGSNVCQKSSYSLHINCGGKMVTEGRSTYDDDLDNGGPARFHRSGTKNWAFVTTGNFMDNDDAGDYSISQNKSSLSMDNADLYMDARVSPTSLTYYGFCLGKGNYTVHLHFADIMFTNDQTFNSLGRRVFDIYIQGELVQKDFNIVEEAGGIDKAIIKNFTAVVSSNTLEIRLYWAGKGTTSLPFRSVYGPLISAISVEPNFTPPSENGSSISVGAVVGIVVAGVIVIILVLGILWWKGCLGKKSSLERELKGLDLRTGVFPLREIKVATNNFDVANKIGEGGFGPVYKGSLSDGTLIAVKQLSSKSKQGNREFLNEIGMISALQHPYLVKLYGCCVEGDQLLLVYEYMENNSLARALFGPEEHQIRLDWPTRYKICIGIARGLAYLHEESRLKVVHRDIKTTNVLLDKDLNPKISDFGLAKLDEEENTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVVLEIINGRNNTIHRPKEQSFSILEWAHLLKENGDLMDLVDRRLGSNFNKEEVLVLIKVALLCTNVTTTVRPSMSSVVSILEGRTFVEEVFSEASDVEEKKLEKMRQYYQELSISKDEPWTSSSTSAADLYPLTLDSSYLQKRG* 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0811 998 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 76 290 - -
Pvu5g0811 998 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 291 360 - -
Pvu5g0811 998 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 385 957 - -
Pvu5g0811 998 SMART serkin_6 664 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0811 998 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 291 360 - -
Pvu5g0811 998 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 385 957 - -
Pvu5g0811 998 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 76 290 - -
Pvu5g0811 998 Pfam Protein kinase domain 665 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0811 998 ProSitePatterns Serine/Threonine protein kinases active-site signature. 786 798 IPR008271 GO:0004672|GO:0006468
Pvu5g0811 998 SUPERFAMILY Protein kinase-like (PK-like) 648 940 IPR011009 -
Pvu5g0811 998 ProSiteProfiles Protein kinase domain profile. 664 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0811 998 Gene3D Ribonuclease Inhibitor 200 266 IPR032675 -
Pvu5g0811 998 Pfam Malectin domain 403 587 IPR021720 -
Pvu5g0811 998 CDD STKc_IRAK 670 937 - -
Pvu5g0811 998 Gene3D Phosphorylase Kinase; domain 1 633 739 - -
Pvu5g0811 998 SUPERFAMILY L domain-like 83 344 - -
Pvu5g0811 998 Gene3D - 399 592 - -
Pvu5g0811 998 Gene3D Ribonuclease Inhibitor 267 377 IPR032675 -
Pvu5g0811 998 Gene3D Ribonuclease Inhibitor 35 199 IPR032675 -
Pvu5g0811 998 Gene3D Transferase(Phosphotransferase) domain 1 740 952 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0811 Pvu-Chr5 16446578 16455987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0811 23 983 Receptor kinase-like Gene Family AT1G53420 55.339 0.0 1024
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu5g0811 Pkinase 4.9e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1757 11 43982318 43999989 Pvu5g0811 5 16446578 16455987 PCT