Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu5g0791 | ATGGTTGGATTCCAGAGTGAGCATAAGGAAGGGAACAAGTACAATGGTAATTCTAATAATATTCCGGATCGCATTCAACGTCTTATGAGACGAAGAGACCTTTTGAAAATCAGCAAGGCATCTCTTTCGAATGAGGGTCCTGATAGTAATAATAATAATAATAATAATATTAATAATAATGTGATTACTGAATATTTTGAGCATGACCCGCGCTTAAGGGAAGATAATAACTCTGCTGCTTCCAATGAACGATTACTGGAAGGAGTGGCGGCGGCACTACGGGGCGAGGTAGAAGATGGAAGACCTTTCAAACAACGGCTTTTGGTGGTGGCCAATAGGCTGCCAGTCTCGGCAATTAGGAAAGGCGAGGATTCCTGGTCTTTGGAGATAAGTGCTGGTGGCCTTGTGAGCGCTCTTTTAGGTGTGAAGGCTTTGGAAGCAAGGTGGATAGGTTGGGCTGGAGTCAATGTGCCTGATGAGATTGGACAAAAGGCACTCACAAAAGCTTTGGCTGAAAAGAGGTGCATCCCAGTATTTCTTGATGAAGAGATTGTTCATCAATACTATAATGGCTATTGCAACAACATTCTGTGGCCCCTTTTTCATTACCTTGGACTTCCACAAGAAGACCGCCTTGCTACCACACGTAGTTTCCAATCTCAATTTGAAGCATACCAGAAGGCAAATCAAATGTTTGCCGATGTTGTAAACAAGCACTATGAAGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTTATGTTTCTTCCACAATGCTTAAAAAATTACAACTCCAAAATGAAAGTTGGTTGGTTTCTTCATACTCCATTTCCATCTTCTGAGATTCACAGGACATTGCCTTCTCGCTCAGAGCTTCTGCATGCTGTTCTTGCAGCTGATTTAGTTGGATTTCACACCTACGACTATGCACGACATTTTGTTAGTGCATGTACTCGCATTCTTGGACTTGAGGGAACGCCTGAAGGGGTTGAGAATCAAGGGAAGCTGACTCGAGTTGCAGCATTTCCAATAGGTATAGACTCAGAACGATTCATACGTGCACTTGACCTTCCTCAAGTGAAGGTTCACATAGAAGATTTACAAGAGCGATTTAAAGGGAGAAAGGTAATGTTAGGTGTTGATCGCCTTGATATGATTAAAGGAATCCCTCAAAAAATTCTAGCATTTGAAAAATTTTTGGAAGAGAATCCTGATTGGCGTGATAAGGTTGTTCTGCTTCAAATTGCCGTGCCAACAAGAACAGATGTTCCTGAGTATCAAAAGCTTACAAGCCAGGTCCATGAAATTGTTGGTCGCATCAATGGCAGATTTGGAACACTTGCTACCGTTCCTATACATCACCTGGATTGCTCTCTTGATTTTCAAAAACTATGTGCTTTGTACGCTGTTACGGATGTAGCACTTGTCACCTCCCTAAGGGATGGAATGAATCTTGTAAGTTACGAATTTGTGGCCTGCCAAGATAAAAAGAAAGGGGTTCTCATTCTCAGCGAATTTGCCGGTGCTGCACAGTCACTTGGTGCTGGGGCAATTCTGGTCAACCCTTGGAACATCACAGAAGTTGCTGCTGCAATTGCCAAGGCTCTGAATATGAAATCGGAAGAAAGAGAGAAGAGACATAAGCATAACTTTAAACATGTAACAACCCACACTGCTCAGGAATGGGCAGAAACTTTTGTGAGTGAACTAAATGATACTATTGACGAGGCACAACTAAGGACAAAACAAGCTCCACCACGGCTCCCAACAGAGACAGCAGTTGAACGTTATTTGCAGTCAAATAATCGGTTGCTTATTTTGGGTTTCAATGGAACTCTAACCGTACCAGTTGAGAGAAAAGGTGATCAGTATCAAGAAACTGAACTCACAATGCATCCAGAACTGAAACAACCCTTGGCAGAACTTTGCAGTGACCCAAAGACCACAGTTGTTGTGCTTAGTGGAAGTGGTAGACCAGTCCTAGATCAAAACTTCAAAGAGTATGACATCTGGCTAGCAGCAGAGAATGGAATGTTCTTAAATCCTTCTAAGGGAGAATGGATGACAACAATGCCAGAGCAACTAAATATGGAATGGGTTGACAGCGTGAAGCATGTTTTTGACTACTTCACAGATAGAACACCTCGATCACATTTTGAAGAAAGGGAAGCTTCCCTTGTATGGAGTTACAGACATTCAGATGGTGAGTTTGGAAAACTGCAAGCTAGGGACATGCTGCAGCATCTCTGGACAGGACCAATATCTAATGCTTCAGTTGAAGTTGTTCAAGGGAGCCGGTCTGTTGAGGTGCGAGCTGCTAATGTTACAAAGGGAGCAGCCATTGACCGTATTCTAGGGGAGATAGTCCACAGTAAATCCATGACAACACCAATTGATTACGTTTTGTGTATAGGACATTTTCTAACAAAGGATGAAGATATATATTCGTTTTTTGAGCCAGAGCTACCTTCTATTGGTGTGGGTCTTCCACGAAGTAAGGTAACAGAAGGAGTTAAGTTTCCTGCGGAGAGGATATCATCATTGAAGAAGATTCCAGCAAGTAAAAATGGAGCAGCAAAATCATCCCAAAATAAGGGTCAACGTGTTATGCCAAGTTCTGAGAGAAAAACAAATAATCATGTGTGCCGTGCGCCACGTCGTCCAGCTCCTGAAAAGATCTCTTGGAATGTCCTTGACCTGAAGAAGGAGAATTACTTTTCTTGTGCTGTTGGACGAACACAAACCAATGCTCGGTATACGCTTGGATCACCAGATGAAGTTGTTGCATTTCTGAAGGAACTCGTCAACTCATCTCCATATTCTTATGTCTGA | 2832 | 0.4251 | MVGFQSEHKEGNKYNGNSNNIPDRIQRLMRRRDLLKISKASLSNEGPDSNNNNNNNINNNVITEYFEHDPRLREDNNSAASNERLLEGVAAALRGEVEDGRPFKQRLLVVANRLPVSAIRKGEDSWSLEISAGGLVSALLGVKALEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFEAYQKANQMFADVVNKHYEEGDVVWCHDYHLMFLPQCLKNYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLHAVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVENQGKLTRVAAFPIGIDSERFIRALDLPQVKVHIEDLQERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPDWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLATVPIHHLDCSLDFQKLCALYAVTDVALVTSLRDGMNLVSYEFVACQDKKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAIAKALNMKSEEREKRHKHNFKHVTTHTAQEWAETFVSELNDTIDEAQLRTKQAPPRLPTETAVERYLQSNNRLLILGFNGTLTVPVERKGDQYQETELTMHPELKQPLAELCSDPKTTVVVLSGSGRPVLDQNFKEYDIWLAAENGMFLNPSKGEWMTTMPEQLNMEWVDSVKHVFDYFTDRTPRSHFEEREASLVWSYRHSDGEFGKLQARDMLQHLWTGPISNASVEVVQGSRSVEVRAANVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLTKDEDIYSFFEPELPSIGVGLPRSKVTEGVKFPAERISSLKKIPASKNGAAKSSQNKGQRVMPSSERKTNNHVCRAPRRPAPEKISWNVLDLKKENYFSCAVGRTQTNARYTLGSPDEVVAFLKELVNSSPYSYV* | 944 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu5g0791 | 943 | Coils | Coil | 25 | 45 | - | - | |
| Pvu5g0791 | 943 | Pfam | Glycosyltransferase family 20 | 106 | 571 | IPR001830 | GO:0003824|GO:0005992 | |
| Pvu5g0791 | 943 | PANTHER | TREHALOSE-6-PHOSPHATE SYNTHASE | 42 | 935 | - | - | |
| Pvu5g0791 | 943 | SUPERFAMILY | HAD-like | 603 | 935 | IPR036412 | - | |
| Pvu5g0791 | 943 | CDD | HAD_TPP | 604 | 835 | - | - | |
| Pvu5g0791 | 943 | Gene3D | Glycogen Phosphorylase B; | 353 | 555 | - | - | |
| Pvu5g0791 | 943 | Gene3D | Glycogen Phosphorylase B; | 98 | 352 | - | - | |
| Pvu5g0791 | 943 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Pvu5g0791 | 943 | MobiDBLite | consensus disorder prediction | 853 | 885 | - | - | |
| Pvu5g0791 | 943 | Pfam | Trehalose-phosphatase | 625 | 833 | IPR003337 | GO:0003824|GO:0005992 | |
| Pvu5g0791 | 943 | MobiDBLite | consensus disorder prediction | 856 | 878 | - | - | |
| Pvu5g0791 | 943 | TIGRFAM | T6PP: trehalose-phosphatase | 603 | 817 | IPR003337 | GO:0003824|GO:0005992 | |
| Pvu5g0791 | 943 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 105 | 574 | - | - | |
| Pvu5g0791 | 943 | Gene3D | - | 607 | 830 | IPR023214 | - | |
| Pvu5g0791 | 943 | Gene3D | - | 693 | 773 | - | - | |
| Pvu5g0791 | 943 | PANTHER | TREHALOSE-6-PHOSPHATE SYNTHASE | 42 | 935 | IPR001830 | GO:0003824|GO:0005992 | |
| Pvu5g0791 | 943 | CDD | GT20_TPS | 106 | 571 | IPR001830 | GO:0003824|GO:0005992 | |
| Pvu5g0791 | 943 | TIGRFAM | trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) | 106 | 571 | IPR012766 | GO:0003825|GO:0005992 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu5g0791 | Pvu-Chr5 | 15242188 | 15253050 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pvu5g0791 | 11 | 938 | Trehalose Biosynthesis Gene Families | AT1G78580 | 74.156 | 0.0 | 1424 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pvu5g0791 | 5 | 15242188 | 15253050 | Pvu11g1767 | 11 | 44107559 | 44125848 | ECH | |
| Pvu5g0791 | 5 | 15242188 | 15253050 | Pvu5g0791 | 5 | 15242188 | 15253050 | ECH |