Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0737 ATGGCCACCGTGCATTTCCAATCCCTAACCCTCACTCGCTCCTCCAGAGCCCCTTCCCTCACCTTCTCTCCTCCGGTTGCCGTCATCGGCAGCCGCATCTCTGCTTCGGTGCCACGATGCTCCGGCCTCCGGCTCCGATCCTCCGTTCGAACCGCTTTTTCGACTCGCGCCGCCTCGAGAACCGCTCCTCGCGGCGGATGCGTGGTTTGCGAAGCACGAGATACCGCCGTCGAAGTGTCGGCTATTACTGACGCAAATTGGGAAAAACTCGTGCTTGAAACCGAGTCTACTGTACTGGTTGAATTCTGGGCTCCATGGTGTGGTCCCTGCCGAATGATCCATCCGATAATTGATGAACTTGCCAAGGAATATTCTGGTAGGCTGAAGTGTTACAAACTCAATACTGATGAGAGCCCTTCAACTGCTAGCCGTTATGGAATTCGAAGTATTCCCACTGTCATTATTTTCAAGAATGGTGAGAAGAAAGATACAGTTATCGGAGCTGTGCCCAAGACAACATTGACCTCAAGCATAGAAAAATTGCTGTGA 549 0.5209 MATVHFQSLTLTRSSRAPSLTFSPPVAVIGSRISASVPRCSGLRLRSSVRTAFSTRAASRTAPRGGCVVCEARDTAVEVSAITDANWEKLVLETESTVLVEFWAPWCGPCRMIHPIIDELAKEYSGRLKCYKLNTDESPSTASRYGIRSIPTVIIFKNGEKKDTVIGAVPKTTLTSSIEKLL* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0737 182 CDD TRX_family 85 179 - -
Pvu5g0737 182 ProSitePatterns Thioredoxin family active site. 99 117 IPR017937 -
Pvu5g0737 182 SUPERFAMILY Thioredoxin-like 70 182 IPR036249 -
Pvu5g0737 182 Gene3D Glutaredoxin 78 182 - -
Pvu5g0737 182 PANTHER GEO12009P1 1 182 - -
Pvu5g0737 182 TIGRFAM thioredoxin: thioredoxin 83 181 IPR005746 GO:0015035
Pvu5g0737 182 PRINTS Thioredoxin family signature 98 106 - -
Pvu5g0737 182 PRINTS Thioredoxin family signature 106 115 - -
Pvu5g0737 182 PRINTS Thioredoxin family signature 146 157 - -
Pvu5g0737 182 PANTHER THIOREDOXIN M-TYPE PROTEIN 1 182 - -
Pvu5g0737 182 Pfam Thioredoxin 79 179 IPR013766 -
Pvu5g0737 182 ProSiteProfiles Thioredoxin domain profile. 70 182 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0737 Pvu-Chr5 11800621 11803897 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0737 5 11800621 11803897 Pvu5g0737 5 11800621 11803897 ECH
Pvu5g0737 5 11800621 11803897 Pvu11g1636 11 41576456 41578571 PCT