LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu5g0671	ATGGAAGCAGCGTGTAGCACGATTCTGATGCTGATTCTGATACTGGTTTTGATATTGGTTCTGATATGGGCATGGATGATGCTAAATTGGTTATGGTTCACTCCAAAGAGGCTTGAAAGGCTTCTCAGAGAGCAAGGTCTTCAAGGGAATCCATATACGCTTTTGGTTGGAGACACCAATGAGTTTGCCAAGATGAGAAAGGAAGCCTTCTCCAAACCCATGGATCTCTTCTCTAACGACATAGTTCAGCGTGTCTACCCCTTTTTCCGTCACAGTATCAACACACATGGGAAAAACTCTTTTATTTGGTTTGGACCGGCACCAAGAGTGATCCTTACTGATCCAGAGCTAATCAAAGATGTATTTAACAAGACATTTGACTTCCAAAAGATTTATCTGAATCCACAAGTCAGGTTACTAACTCCTGGCCTTGTAAGCCACGAGGGAGAAAAGTGGAGGAAGCACAGAAAGATAATTACTCCTGTTTTCAATTTGGAGAAGTTGAAGGATATGTTACCAGTACTCATCAAATGTTGTGATGATCTTATTAGCAAATGGGAGGAAATGTTATCATTGGATGGATCAAGTGAAATGGACGTATGGCCTTTCCTTCAGAATTTGACTAGTGAGGCTATTTCTCGAACAGCATTTGGAAGTAGTTATGAAGAAGGAAGAAGAATATTTCAACTCCTAAAAGAGCAGAGTGAACTAACAGCGCAACTTGTGTATAAAGTTTACATCCCTGGATGGAGGTTTGTACCTACTACTACCCATAGAAGGATGAAGGAAATTGACAAGGAAACAAAAGCTTCACTTATGGATATTATTAATAACAAAGAGAAAGCACTAAAGGCTGGTGAAGCCACTAAAAATGACTTGTTAGACATACTTCTCGAGTCAAATCACAAGGAAATTCAAGAACATGGAAACAACAAGAATGTTGGATTGAATATTGAAGATGTTATTGAGGAATGCAAGTTATTTTACTTTGCAGGGCAGGATTCCACTTCATCTTTGCTTGTTTGGACGATGATATTATTAAGTATGTACCCCGATTGGCAAACACGTGCAAGGGAAGAAGTCTTACAAGTTTTTGGCAATCATAAACCAGATTTTGATGGACTGAATCACCTTAAGATTGTTCCCATGATTTTAAATGAGGTTTTTAGGCTATACCCACCAGTAATTGGTCTTCCTCGAAAAGTTCTTAAAGACGTGAAACTTGGAAATCTATCATTAGTCGCTGGAATGCAAGTTTCCATTCCAATAATTTTGGTTCATCATGATTGTGAGCTATGGGGTGATGATGCTAAGGAGTTCAAACCTGAGAGATTTGCTGAAGGAGTTCTAAAGGCCACAAATGGCAGAGCTTCACTAATTCCCTTTGGAGGGGGTCCTAGGATATGCACTGGACGAAACTTCTCCTTCTTGGAAGCAAAGATTGCTTTGTCAATGATTTTACAACGCTTCTCATTTGAACTCTCTTCGAGCTATACTCATGCTCCAATTACCGCGATTACTCTTCAACCACAATATGGTGCTCATCTCATTCTACATAAAGTGGAAATATAA	1572	0.3938	MEAACSTILMLILILVLILVLIWAWMMLNWLWFTPKRLERLLREQGLQGNPYTLLVGDTNEFAKMRKEAFSKPMDLFSNDIVQRVYPFFRHSINTHGKNSFIWFGPAPRVILTDPELIKDVFNKTFDFQKIYLNPQVRLLTPGLVSHEGEKWRKHRKIITPVFNLEKLKDMLPVLIKCCDDLISKWEEMLSLDGSSEMDVWPFLQNLTSEAISRTAFGSSYEEGRRIFQLLKEQSELTAQLVYKVYIPGWRFVPTTTHRRMKEIDKETKASLMDIINNKEKALKAGEATKNDLLDILLESNHKEIQEHGNNKNVGLNIEDVIEECKLFYFAGQDSTSSLLVWTMILLSMYPDWQTRAREEVLQVFGNHKPDFDGLNHLKIVPMILNEVFRLYPPVIGLPRKVLKDVKLGNLSLVAGMQVSIPIILVHHDCELWGDDAKEFKPERFAEGVLKATNGRASLIPFGGGPRICTGRNFSFLEAKIALSMILQRFSFELSSSYTHAPITAITLQPQYGAHLILHKVEI*	524

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu5g0671	523	PRINTS	P450 superfamily signature	331	348	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu5g0671	523	PRINTS	P450 superfamily signature	383	394	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu5g0671	523	PRINTS	P450 superfamily signature	460	469	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu5g0671	523	PRINTS	P450 superfamily signature	469	480	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu5g0671	523	PANTHER	CYTOCHROME	8	518	-	-
	Pvu5g0671	523	PANTHER	CYTOCHROME P450 FAMILY MEMBER	8	518	-	-
	Pvu5g0671	523	Pfam	Cytochrome P450	88	497	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu5g0671	523	Gene3D	Cytochrome P450	31	522	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu5g0671	523	SUPERFAMILY	Cytochrome P450	82	519	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu5g0671	523	PRINTS	E-class P450 group I signature	93	112	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu5g0671	523	PRINTS	E-class P450 group I signature	207	225	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu5g0671	523	PRINTS	E-class P450 group I signature	320	337	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu5g0671	523	PRINTS	E-class P450 group I signature	340	366	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu5g0671	523	PRINTS	E-class P450 group I signature	459	469	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu5g0671	523	PRINTS	E-class P450 group I signature	469	492	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu5g0671	Pvu-Chr5	9815077	9819361	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu5g0671	23	521	Cytochrome P450	AT3G14610	55.489	0.0	575

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu5g0671	5	9815077	9819361	Pvu5g0671	5	9815077	9819361	ECH