Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0645 ATGGATATGACGGAAGTTTCAATCTTGCACCATGTGGGGATTGTGCTGATTGCGATTTGGATTCTCTCTGCATTCAATTGGTGCCACTCTGTTGTTTACTTTGTAGCTCTGATCTATCTTTTCCTGGTTCATGAGCGATATGTTACGAGGCTGCGGAAGAAGTTGCAGTTTGAGGAGAGGAAGCAAGCTAATCAAAGAAGGGTGCTTTCAGATTCTGAAACAGTCCGGTGGTTGAACCATGCAGTTGAAAAGATATGGCCTATATGTATGGAACAGATTGCCTCTCAGAAAATATTATTCCCTATCATACCATGGTTCTTAGAGAAGTACAAACCTTGGACTGCTAAGGAAGCTGTTGTTCAGCATCTATACCTGGGGAGAAACCCACCTTTCTTTACTGAAATTAGGGTTCTTCGCCAGACTGAGGATGACCACTTGGTTCTGGAGTTAGGAATGAATTTTCTTACCGCTGATGATATGAGTGCAATACTTGCTGTCAAACTAAGAAAAAGATTGGGGTTTGGAATGTGGGCAAAACTGCACATTAAAGGAATGCATATTGAAGGGAAGATATTAGTTGGGGTAAAATTTCTACCGACATGGCCTTTTCTTGGCCGTTTGCGTGTATGCTTTGTTGAACCTCCATATTTTCAAATGACTGTCAAACCTATGTTTACTCATGGGCTTGATGTGACTGAACTTCCAGGCATTGCTGGGTGGCTAGATAAGTTGCTGTCTATTGCTTTTGAACAGACCCTTGTTGAGCCCAATATGCTGGTTGTTAATGTTGAGAAATTTGTTTCGTCAGAGCAAGAGTGTTGGTTCTCTGTGGATGAGAAGGAGCCCATTGCTTATGCTAGAGTAGAAGTTATTGAAGCATCTGAGATGAAGCCATCAGATCTAAATGGATTAGCGGATCCTTATGTGAAAGGTCATATAGGTGGATACAGATTTAGGACAAAAGTACAAAGGAAAACACTTTCTCCAAAATGGCATGAAGAATTTAAAATTCCCATCATAACATGGGAATCTGATAATCTGCTGGTTATTGCAGTTCGTGACAAGGACCATTTCTATGATGATATCCTTGGGGACTGTTTTGTGAACATCAACGAATTTAGGGATGGCCAAAGATATGATATGTGGCTGCAACTTCAGAACATGAAAATGGGGAGGCTGCGTTTGGCAATAACTATTCTTGAAGCTAATGGAAAGGGAGTTGATACTACAAGTGAACAGGAAAAAATGGACTTTAAAGTACCAAAAAATTCATCGGCTGCTAATAACACTACTGATAATAGTTCCTTTTCACCTGTTCCACCTGAAAAATCTCAGAAGTTGGCAGATAACTATGAGCCTATAGACATTGAAGGGCAAAAGAAGACAGGAATTTGGGTTCATCACCCAGGAAGTGAAGTTTTCCAAAGGTGGGAGCCTAGGAAAGGGAAGAGTCGGCGCATGGATACTGAAATTCATGGGGAACCTAATGATTTGGTTGGTAGCGGTAGTTCAACCGTATCTGGATCCTTGAACAATGACAGCAGCAGTTCAGATAATAATAATCCTGAAGAAAAGCACCGAATGAGATCAGTTAGGAGGGGCCTGCACAAGATTGGTTCAGTATTCCACCGAAGTAAAAGGGGGGAGTCTGTTGGAGAGGACATTCCATCTCCACATGATAACATTAGGTCAATGAATTCTAAGGGGATGATCGGTGTGCAGTTTGTGATGGATGAGAACATTTCTGACTTTCCAACTCCTAAGGCTCAGGTAGAAGGGGGATCAAATGAAGGGAGTGGTCCTGAAAGCCCTGCAAAGGGACATGTCAAGGATATGGCAAAGCATATTTTGAAACATGCAGAAAAATCAGCTCGAGGCTTGAGACATGTTCTTTCGTGTAAGTCAAGGAAATCTAAAGATGAGTCTCTAGCAGTTCCAGAAAGAGTAAATGAATCTGGTTCTTCAGATGATGAATCTAACGCAGTTCAGTCTCCCACAGTTGCAACAACTCCAGTTGGCTCTCAGGCTTCGGCCCCTGGCAGCAATGATTCCCCCCTTTCTAGGGTGCCGGTGGTTCAAACAGTTCCATCTAACACTCATGAGGATAATGAAGCACCAAGGGAGATAGTTAATGTAAAAGATGAACCTGAAAAGGCATGCTACCCTCAAAGGTCAAGTGAAGAGTTTGTTAAATCTGATGAATTGGAGCATGTTAAAGAAGAAATTGTGGGCAGATAA 2238 0.42 MDMTEVSILHHVGIVLIAIWILSAFNWCHSVVYFVALIYLFLVHERYVTRLRKKLQFEERKQANQRRVLSDSETVRWLNHAVEKIWPICMEQIASQKILFPIIPWFLEKYKPWTAKEAVVQHLYLGRNPPFFTEIRVLRQTEDDHLVLELGMNFLTADDMSAILAVKLRKRLGFGMWAKLHIKGMHIEGKILVGVKFLPTWPFLGRLRVCFVEPPYFQMTVKPMFTHGLDVTELPGIAGWLDKLLSIAFEQTLVEPNMLVVNVEKFVSSEQECWFSVDEKEPIAYARVEVIEASEMKPSDLNGLADPYVKGHIGGYRFRTKVQRKTLSPKWHEEFKIPIITWESDNLLVIAVRDKDHFYDDILGDCFVNINEFRDGQRYDMWLQLQNMKMGRLRLAITILEANGKGVDTTSEQEKMDFKVPKNSSAANNTTDNSSFSPVPPEKSQKLADNYEPIDIEGQKKTGIWVHHPGSEVFQRWEPRKGKSRRMDTEIHGEPNDLVGSGSSTVSGSLNNDSSSSDNNNPEEKHRMRSVRRGLHKIGSVFHRSKRGESVGEDIPSPHDNIRSMNSKGMIGVQFVMDENISDFPTPKAQVEGGSNEGSGPESPAKGHVKDMAKHILKHAEKSARGLRHVLSCKSRKSKDESLAVPERVNESGSSDDESNAVQSPTVATTPVGSQASAPGSNDSPLSRVPVVQTVPSNTHEDNEAPREIVNVKDEPEKACYPQRSSEEFVKSDELEHVKEEIVGR* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0645 745 PANTHER C2 DOMAIN-CONTAINING PROTEIN-LIKE 2 681 - -
Pvu5g0645 745 MobiDBLite consensus disorder prediction 701 728 - -
Pvu5g0645 745 MobiDBLite consensus disorder prediction 542 556 - -
Pvu5g0645 745 CDD C2 287 385 - -
Pvu5g0645 745 Gene3D C2 domain 266 402 IPR035892 -
Pvu5g0645 745 Pfam C2 domain 286 385 IPR000008 -
Pvu5g0645 745 MobiDBLite consensus disorder prediction 655 700 - -
Pvu5g0645 745 MobiDBLite consensus disorder prediction 422 441 - -
Pvu5g0645 745 MobiDBLite consensus disorder prediction 584 607 - -
Pvu5g0645 745 MobiDBLite consensus disorder prediction 475 564 - -
Pvu5g0645 745 MobiDBLite consensus disorder prediction 408 446 - -
Pvu5g0645 745 MobiDBLite consensus disorder prediction 621 654 - -
Pvu5g0645 745 MobiDBLite consensus disorder prediction 475 493 - -
Pvu5g0645 745 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 71 264 IPR031468 GO:0008289
Pvu5g0645 745 SMART C2_3c 285 382 IPR000008 -
Pvu5g0645 745 MobiDBLite consensus disorder prediction 621 728 - -
Pvu5g0645 745 MobiDBLite consensus disorder prediction 498 518 - -
Pvu5g0645 745 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 276 401 IPR035892 -
Pvu5g0645 745 ProSiteProfiles C2 domain profile. 269 383 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0645 Pvu-Chr5 8892890 8899371 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0645 285 373 Lipid Metabolism Gene Families AT5G48060 36.264 2.19e-07 52.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0645 5 8892890 8899371 Pvu5g0645 5 8892890 8899371 ECH