Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0595 ATGTGGACCGAGGAAACCCCGAATAAACCCCACCATCCAGCCTTGCCACATCTATTTGCATGCACTGGTTCTATTTTTCTTCCTTCCTCTTCTCCCTCTTCTCCCAAACCATTCCCAATAAGAGCAATCACGCCATCATCGCACACTCAAGAGAAAACACAATACAATACAACACTCAAACCACATCAATCTCAGATATACTATACTATCTTCATGGCCGTTGAGGCACGCCATCTCAATCTCTTCCCCTCTCAACTCCTGACCAACCGCCAATTGACGAATTCTGTGGATGCGAATATCAACATGTATAACGCGCAACAGATTGGTTATTCTTCGTTTTTGCCGTCATCCGGTGCCCTCACGGAACCGGTGCTTCCTTCGTCGGTGTACAATTCGCTCGGAAACGCTGTCAAATCTGAAAGCGGTTTGACCTACAACAACAGCAACAGCGCTGTTGTTCCTCCCATGTCCAGAAAGCGTTCCAGAGAAAATTACAGCTACAACGATTCCTTCTCGTTTCTCGGCCAAGACGTTTCTCTTCAGATCCAACAGCAGCAACTTGACATCGAGCATTTAATCATGCAACGCATGGAGAAGGTGAGAATAGAGATTGATCAGAAGCGGAAGAGGCAAGCGAGGAGAGTAATCGAGGCGATTGAGGTAGGCGTGATGAAGAAGCTGAAGGCGAAGGAGGAGGAGATAGAGAAAATCGGGAAACTTAATTGGGCGTTGGAAGAGAGAGTGAAGTCTCTGTGCATGGAGAATCAGATTTGGCGTGACTTGGCTCAAACGAACGAAGCCACGGCGAATGCTCTGCGGTGTAATCTGGAACAGGTGTTGGCGCAGCGCGGAATGGTGGACGACGGCACCGCCGCCTTGATGGACGACGCTCAGTCTTGCTGCGGGAGCACCGACGAGGACGGTGAAGGGGAGAAAGAGGTTGAGTGGCGGACGGTAGCAGCAGGGTGCGCAGGGGTGAAGGATAAGGAGGACGGTGGTTGTGAAAAAATGATGATTGGTGAGAGTAGTGGGAGGTTGTGCAGGAACTGTGGGAAAGAAGAGTCGTGCGTGCTGATTTTGCCGTGCCGGCACCTGTGTTTGTGTACTGTGTGTGGGTCTACACTCCACATTTGTCCTATATGTAAATCCTTCAAGACTGCTAGTGTCCATGTTAACATGTCCTAA 1185 0.497 MWTEETPNKPHHPALPHLFACTGSIFLPSSSPSSPKPFPIRAITPSSHTQEKTQYNTTLKPHQSQIYYTIFMAVEARHLNLFPSQLLTNRQLTNSVDANINMYNAQQIGYSSFLPSSGALTEPVLPSSVYNSLGNAVKSESGLTYNNSNSAVVPPMSRKRSRENYSYNDSFSFLGQDVSLQIQQQQLDIEHLIMQRMEKVRIEIDQKRKRQARRVIEAIEVGVMKKLKAKEEEIEKIGKLNWALEERVKSLCMENQIWRDLAQTNEATANALRCNLEQVLAQRGMVDDGTAALMDDAQSCCGSTDEDGEGEKEVEWRTVAAGCAGVKDKEDGGCEKMMIGESSGRLCRNCGKEESCVLILPCRHLCLCTVCGSTLHICPICKSFKTASVHVNMS* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0595 394 MobiDBLite consensus disorder prediction 30 56 - -
Pvu5g0595 394 Pfam Zinc finger, C3HC4 type (RING finger) 345 383 - -
Pvu5g0595 394 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 327 394 IPR013083 -
Pvu5g0595 394 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 72 393 IPR017066 -
Pvu5g0595 394 ProSiteProfiles Zinc finger RING-type profile. 347 382 IPR001841 -
Pvu5g0595 394 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 2-RELATED 72 393 - -
Pvu5g0595 394 Coils Coil 227 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0595 Pvu-Chr5 7673331 7674993 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0595 340 383 Miscellaneous Gene Families AT4G39050 36.364 1.30e-06 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0595 5 7673331 7674993 Pvu5g0595 5 7673331 7674993 ECH
Pvu5g0595 5 7673331 7674993 Pvu11g1812 11 44884218 44886157 PCT