Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0562 ATGGAAGAACCCACATTGTTGTTCCCAGACACAGACCTGGATCTCAGTTTTACCAGCACCACCACCGACCGCACCAGCGCCCGAACCAGCCTCGCTCGAACCAGCAGCCTCACACTCAGCTTCAACGATCGTATCTCCACCATCGAGCCTTCCATCTCCGTCGTCAACCGTCGCCCCCACCGTAGCTCCGACCCCCACTGGACCGCCATCAAAGCCGCCACCATGCTCTCCTCCGACGGCCGCCTCCACCTCCGCCATCTTAAGCTCCTCCGCCATCTCGGCTCCGGCAACCTCGGCCGCGTGTTCCTCTGCCGCCTCCGCGACTACGACGGCGCCAACTTCGCCCTCAAAGTCGTCGACAAAGACCTCCTCACCCCCAAAAAACTCTCCCACGCAGAGACCGAGGCCGAAATCCTCCAAGCGCTCGATCATCCCTTCCTCCCCACGCTCTACGCGCGCATCGACGTCTCCCACTACACGTGCCTCCTCATGGACTATTGCCCCGCCGGGGACCTCCACTCCCTCCTCCGCAAACAGCCCCACCACCGCCTCCCCCTCTCGGTAGCGCGTTTCTTCGCCGCCGAGGTCCTCGTCGCCCTCGAGTACCTCCACGCGCTAGGAATCGTCTACCGCGACCTCAAACCCGAGAACGTTCTCTTGCGCGAAGACGGCCACGTCATGCTCTCGGATTTCGATCTCTGCTTCAAATCCGACGTGGCACCCAGCGTCACTCTCCGGACCCACAGCAAACCCCCTCGCGCGGGTCCCACCAACGGTCGCTTCAGTTATAACCGTCGCCCCTACAAACAACACCAGCAAACGTTTCTCGCGGAGTTCATTGCGGAACCCGTGACGGCGTTTTCACGGTCGTGCGTGGGGACGCACGAGTACCTGGCGCCCGAGCTCGTCTCCGGTAACGGTCATGGTAACGGCGTGGACTGGTGGGCTTTTGGGGTTTTCGTTTACGAGTTGCTGTACGGGACGACGCCGTTTAAGGGGTGCAACAAGGAGGGCACCCTGCGCAACATAGCGTCGTGCAAGGACGTGAGATTCGTCCACGTGGCGGAAGGAGAAGAGGCTGGGATGGGTGAGGCTAGGGATTTGATTGAGAAGCTGTTGGTGAAGGATCCAAGGAGGAGGCTAGGGTGCACCAAGGGTGCCACTGATGTTAAACGACACCCGTTTTTTGATGGGATCAAGTGGCCGTTGATTCGAACTTACCGGCCACCGGAAGTGAAGGGATTGGTGAGAAGGAACAAGTCGCACGTGAGTGGTCACGTGAGTTGCAAGAGAACGAGGTGGTCGTGGAAGACACTTGCCCATGTCCTTCGGAAATATAATTTGATTCCAAACTATAGTAGTAATAATAATAATAATAACTATTATTATCACTATGTTGATGATAGTTATAAGGTTAATTAA 1422 0.5752 MEEPTLLFPDTDLDLSFTSTTTDRTSARTSLARTSSLTLSFNDRISTIEPSISVVNRRPHRSSDPHWTAIKAATMLSSDGRLHLRHLKLLRHLGSGNLGRVFLCRLRDYDGANFALKVVDKDLLTPKKLSHAETEAEILQALDHPFLPTLYARIDVSHYTCLLMDYCPAGDLHSLLRKQPHHRLPLSVARFFAAEVLVALEYLHALGIVYRDLKPENVLLREDGHVMLSDFDLCFKSDVAPSVTLRTHSKPPRAGPTNGRFSYNRRPYKQHQQTFLAEFIAEPVTAFSRSCVGTHEYLAPELVSGNGHGNGVDWWAFGVFVYELLYGTTPFKGCNKEGTLRNIASCKDVRFVHVAEGEEAGMGEARDLIEKLLVKDPRRRLGCTKGATDVKRHPFFDGIKWPLIRTYRPPEVKGLVRRNKSHVSGHVSCKRTRWSWKTLAHVLRKYNLIPNYSSNNNNNNYYYHYVDDSYKVN* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0562 473 Pfam Protein kinase domain 89 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0562 473 PANTHER SERINE/THREONINE-PROTEIN KINASE WAG1 9 426 - -
Pvu5g0562 473 SUPERFAMILY Protein kinase-like (PK-like) 62 414 IPR011009 -
Pvu5g0562 473 SMART serkin_6 87 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0562 473 CDD STKc_phototropin_like 94 412 - -
Pvu5g0562 473 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Pvu5g0562 473 Gene3D Transferase(Phosphotransferase) domain 1 289 410 - -
Pvu5g0562 473 Gene3D Transferase(Phosphotransferase) domain 1 171 237 - -
Pvu5g0562 473 Gene3D Phosphorylase Kinase; domain 1 86 170 - -
Pvu5g0562 473 ProSiteProfiles Protein kinase domain profile. 87 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0562 473 PANTHER FLIPPASE KINASE 1-RELATED 9 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0562 Pvu-Chr5 7070209 7071630 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0562 1 470 AGC Kinase Gene Family AT3G14370 64.876 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pvu5g0562 Pkinase 1e-53 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0562 5 7070209 7071630 Pvu5g0562 5 7070209 7071630 ECH