Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0550 ATGGGAGATGAGGTGATTCTGTTGAATTTTTGGTTAAGCCCTTACGGGATTAGGGTCCGGATTGCACTAGAGGAAAAGGGCATCAAGTATGAGAATAGAGAAGAGGACTTACGCAACAAGAGCCCTTTACTCCTTCAGATGAACCCAGTTCATAAGAAAATACCAGTTCTCATCCACAATGGCAAACCCATTTGTGAGTCACTAATTGCTGTTGAGTATATTGACGAGGTTTGGAAGGATCAATCTCCCTTGTTGCCTTCTAATCCTTACCAGAGAGCACAAGCAAGATTCTGGGCTAACTATGTTGACACCGAGTTATATAAGCATGCCTTGAGGTTTTGGACAACTGAAGGAGAAGAGAGAGAAGGTGCTAGGAAGGAATTTTTGGAGTGTCTAAAGTTATTTGAAGAACAACTGGGGGATGAGCCTTATTTTGGTGGAAACAACTTTGGCATCGTTGATGTTGCACTTGTTCCTTTGTTCTGTTACTTTTATACATTTAGTTTGTATGACAATTTCATCAGCGAGGCACAGTACCCCAAAATCATTTCTTGGGCTAAGAGGTGCACCCAAAAAGAGAGTGTGTCCAAAAGTTTTCCCTCAGAGGAGTTGGTCAAAGAGTATTTATCCCAGAAGAGACAACACAAAGGATAG 654 0.4174 MGDEVILLNFWLSPYGIRVRIALEEKGIKYENREEDLRNKSPLLLQMNPVHKKIPVLIHNGKPICESLIAVEYIDEVWKDQSPLLPSNPYQRAQARFWANYVDTELYKHALRFWTTEGEEREGARKEFLECLKLFEEQLGDEPYFGGNNFGIVDVALVPLFCYFYTFSLYDNFISEAQYPKIISWAKRCTQKESVSKSFPSEELVKEYLSQKRQHKG* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0550 217 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Pvu5g0550 217 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Pvu5g0550 217 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 211 IPR045073 -
Pvu5g0550 217 SFLD Glutathione Transferase (cytosolic) 3 215 IPR040079 -
Pvu5g0550 217 Pfam Glutathione S-transferase, C-terminal domain 120 188 - -
Pvu5g0550 217 SFLD Main.3: Omega- and Tau-like 3 215 IPR045073 -
Pvu5g0550 217 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 208 IPR010987 -
Pvu5g0550 217 SUPERFAMILY GST C-terminal domain-like 76 214 IPR036282 -
Pvu5g0550 217 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Pvu5g0550 217 CDD GST_N_Tau 5 78 - -
Pvu5g0550 217 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 211 - -
Pvu5g0550 217 Gene3D Glutaredoxin 1 87 - -
Pvu5g0550 217 CDD GST_C_Tau 89 211 IPR045074 GO:0004364|GO:0006749
Pvu5g0550 217 Gene3D - 88 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0550 Pvu-Chr5 6913468 6914609 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0550 1 214 Glutathione S-transferase Gene Family AT1G78380 57.477 7.53e-96 277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1854 11 45351233 45352724 Pvu5g0550 5 6913468 6914609 PCT