Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0536 ATGGAGGTCACCAATGTCAGTGAGTATGAGGCTATTGCAAAGCAGAAATTACCAAAGATGGCGTTTGACTACTACGCATCTGGTGCAGAGGATCAGTGGACTCTGCAAGAGAACAGAAATGCCTTTTCCAGAATTTTGTTTCGGCCTCGTATTCTTATCGATGTGAGCAAGATAGACATCACAACTACTGTCTTGGGCTTCAAAATATCCATGCCAATCATGATTGCCCCAACAGCCTTTCAGAAAATGGCTCATCCCGAGGGAGAATATGCCACAGCAAGAGCTGCCTCTGCAGCTGGAACAATCATGACTTTGTCCTCGTGGGCCACTTCAAGTGTTGAAGAGGTGGCTTCAACAGGACCTGGCATTCGCTTTTTCCAGCTATATGTGTACAAGGACAGGAATGTGGTTGCTCAGCTTGTGAGAAGAGCTGAAAGGGCTGGATTCAAAGCCATTGCCCTTACAGTTGATACTCCAATACTAGGACGCAGAGAAGCTGATATCAAGAACAGATTCACACTGCCACCATTTTTGACATTGAAGAACTTTGAAGGATTGGACCTTGGAAAGATGGACAAAGCAAATGACTCTGGACTTGCTTCATATGTTTCTGGTCAAATTGATCGCACTCTAAGTTGGAAGGATGTGAAGTGGCTCCAAACAATCACCTCTCTCCCAATTCTGGTGAAGGGTGTGCTGACTGCTGAGGACACAAGGATAGCTATACAAAGTGGTGCAGCTGGAATTATAGTGTCCAACCATGGAGCTAGACAACTTGACTATGTTCCAGCCACCATATCAGCATTAGAAGAGGTTGTCAAAGCTGCTGAAGGTCGTCTTCCTGTATTTCTGGATGGTGGAGTTCGCCGTGGAACTGATGTCTTCAAGGCATTGGCACTAGGTGCCTCTGGCATATTTATTGGACGCCCTGTGGTGTTCTCCTTGGCTGCTGAAGGAGAGGCTGGTGTAAGAAAAGTGTTGCAGATGCTACGTGAAGAGTTTGAGCTAACCATGGCCTTGAGTGGTTGTCGTTCCCTAAAGGAGATCACTCGTGATCACATTGTGACTGATTGGGACCAACCTCGCACTCACCCTCGCACCCGTGCGTTATTGTGA 1116 0.4686 MEVTNVSEYEAIAKQKLPKMAFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDITTTVLGFKISMPIMIAPTAFQKMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPILGRREADIKNRFTLPPFLTLKNFEGLDLGKMDKANDSGLASYVSGQIDRTLSWKDVKWLQTITSLPILVKGVLTAEDTRIAIQSGAAGIIVSNHGARQLDYVPATISALEEVVKAAEGRLPVFLDGGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVRKVLQMLREEFELTMALSGCRSLKEITRDHIVTDWDQPRTHPRTRALL* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0536 371 CDD alpha_hydroxyacid_oxid_FMN 7 351 IPR012133 GO:0010181|GO:0016491
Pvu5g0536 371 ProSitePatterns FMN-dependent alpha-hydroxy acid dehydrogenases active site. 252 258 IPR008259 GO:0016491
Pvu5g0536 371 Gene3D Aldolase class I 1 369 IPR013785 -
Pvu5g0536 371 ProSiteProfiles FMN-dependent alpha-hydroxy acid dehydrogenase domain profile. 1 359 IPR037396 -
Pvu5g0536 371 PANTHER PEROXISOMAL (S)-2-HYDROXY-ACID OXIDASE-LIKE ISOFORM X1 1 367 - -
Pvu5g0536 371 PANTHER S -2-HYDROXY-ACID OXIDASE-RELATED 1 367 - -
Pvu5g0536 371 SUPERFAMILY FMN-linked oxidoreductases 2 356 - -
Pvu5g0536 371 PIRSF Al-hdrx_acd_dh 1 358 IPR012133 GO:0010181|GO:0016491
Pvu5g0536 371 Pfam FMN-dependent dehydrogenase 13 355 IPR000262 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0536 Pvu-Chr5 6647720 6652553 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0536 5 6647720 6652553 Pvu5g0536 5 6647720 6652553 ECH