Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0525 ATGGCCTCAGCCGCAGCCCCCACCACTTTCTCTCTCCTCCACTCCGCCACCCCCGCCGCCTCCTCTTCCTCGCGCGTCCAGCTCTCCTCCTCCCTCCGCGTCCGCCCCCTCACCCGCCGTCTGGGCTTCACGGCCGCGGACCCGCTGCTGGCGGCGAATGTGGCTGCGCGGGTGGCCGCGGTGAAGGTCGGGAGGGGCAGGAGAGGGGTGGTGTCGATGGCCAAGAAGAGCGTGGGCGACCTGTCTGCGGCGGACTTGAAAGGAAAGAAGGTGTTCGTGAGGGCGGACCTCAACGTCCCGCTCGACGACAACCAGAACATCACTGACGACACCAGAATCCGCGCCGCCATTCCCACCATCAAATACCTCATCCAAAACGGCGCCAAAGTCATCCTCTCTAGCCACTTGGGGCGACCAAAGGGTGTCACTCCCAAATACAGCTTGGGGCCTCTTGTACCTCGGCTTTCTGAACTCATTGGTTTCCCGGTTGTCAAGGCTGAGGATAGTATTGGTCCAGAAGTGGAAAAGTTGGTGGCTTCTCTTCCAGATGGAGGTGTTCTTCTTCTAGAAAATGTGAGGTTTTACAAGGAGGAAGAAAAGAATGATCCTGAGCATGCAAAAAAGCTTGCCTCTCTGGCAGATCTGTTTGTGAATGATGCATTTGGTACTGCTCATAGGGCACATGCATCAACAGAGGGGGTTACTAAATTCTTAAAGCCATCTGTTGCTGGTTTTCTTTTGCAAAAGGAACTTGATTACCTTGTTGGGGCAGTATCAAGCCCAAAAAGACCATTTGCCGCCATTGTTGGTGGTTCCAAGGTCTCATCTAAAATTGGAGTGATTGAGTCACTTTTAGAAAAGGTTGACATCCTTCTTCTTGGTGGTGGAATGATCTTCACATTTTACAAGGCACAAGGTCTTTCAGTCGGATCTTCCCTTGTAGAGGAAGATAAATTGGATCTTGCTACAACACTACTTGCAAAAGCCAAGGAAAAGGGGGTGTCTCTCTTGTTACCTAGTGATGTGGTGATTGCAGACAAATTTGCTCCTGATGCAAACAGCAAGGTCGTGCCAGCGTCTGCCATCCCTGATGGCTGGATGGGATTGGATATTGGTCCCGATTCTGTTAAGTCATTCAATGAAGCATTGGATACTACCAAAACCATCATATGGAATGGACCAATGGGAGTGTTTGAATTTGACAAGTTTGCTGTTGGGACAGAGGCTATTGCCAAGAAGCTAGCTGATCTCAGTGAAAAGGGGGTCACCACAATTATTGGAGGAGGAGATTCTGTTGCAGCTGTGGAGAAAGTTGGAGTTGCCAATGTCATGAGTCACATATCTACTGGTGGTGGTGCCAGTTTGGAGTTATTGGAAGGGAAAGAGCTTCCTGGAGTCGTTGCTCTTGATGAAGCCACACCAGTCCCTGTGTAA 1434 0.5105 MASAAAPTTFSLLHSATPAASSSSRVQLSSSLRVRPLTRRLGFTAADPLLAANVAARVAAVKVGRGRRGVVSMAKKSVGDLSAADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAIPTIKYLIQNGAKVILSSHLGRPKGVTPKYSLGPLVPRLSELIGFPVVKAEDSIGPEVEKLVASLPDGGVLLLENVRFYKEEEKNDPEHAKKLASLADLFVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLEKVDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLDLATTLLAKAKEKGVSLLLPSDVVIADKFAPDANSKVVPASAIPDGWMGLDIGPDSVKSFNEALDTTKTIIWNGPMGVFEFDKFAVGTEAIAKKLADLSEKGVTTIIGGGDSVAAVEKVGVANVMSHISTGGGASLELLEGKELPGVVALDEATPVPV* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0525 477 CDD Phosphoglycerate_kinase 84 471 IPR001576 GO:0004618|GO:0006096
Pvu5g0525 477 Gene3D - 260 447 IPR015824 GO:0004618|GO:0006096
Pvu5g0525 477 PRINTS Phosphoglycerate kinase family signature 85 101 IPR001576 GO:0004618|GO:0006096
Pvu5g0525 477 PRINTS Phosphoglycerate kinase family signature 107 129 IPR001576 GO:0004618|GO:0006096
Pvu5g0525 477 PRINTS Phosphoglycerate kinase family signature 184 199 IPR001576 GO:0004618|GO:0006096
Pvu5g0525 477 PRINTS Phosphoglycerate kinase family signature 212 234 IPR001576 GO:0004618|GO:0006096
Pvu5g0525 477 PRINTS Phosphoglycerate kinase family signature 243 265 IPR001576 GO:0004618|GO:0006096
Pvu5g0525 477 PRINTS Phosphoglycerate kinase family signature 266 285 IPR001576 GO:0004618|GO:0006096
Pvu5g0525 477 PRINTS Phosphoglycerate kinase family signature 388 413 IPR001576 GO:0004618|GO:0006096
Pvu5g0525 477 PRINTS Phosphoglycerate kinase family signature 424 435 IPR001576 GO:0004618|GO:0006096
Pvu5g0525 477 PRINTS Phosphoglycerate kinase family signature 447 464 IPR001576 GO:0004618|GO:0006096
Pvu5g0525 477 ProSitePatterns Phosphoglycerate kinase signature. 90 100 IPR015911 GO:0004618|GO:0006096
Pvu5g0525 477 SUPERFAMILY Phosphoglycerate kinase 80 471 IPR036043 GO:0004618|GO:0006096
Pvu5g0525 477 PIRSF Pgk 71 476 IPR001576 GO:0004618|GO:0006096
Pvu5g0525 477 Gene3D - 43 144 IPR015824 GO:0004618|GO:0006096
Pvu5g0525 477 Gene3D - 146 472 IPR015824 GO:0004618|GO:0006096
Pvu5g0525 477 Pfam Phosphoglycerate kinase 83 461 IPR001576 GO:0004618|GO:0006096
Pvu5g0525 477 PANTHER PHOSPHOGLYCERATE KINASE 1 472 IPR001576 GO:0004618|GO:0006096
Pvu5g0525 477 PANTHER PHOSPHOGLYCERATE KINASE 1 472 - -
Pvu5g0525 477 Hamap Phosphoglycerate kinase [pgk]. 80 471 IPR001576 GO:0004618|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0525 Pvu-Chr5 6076203 6080368 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0525 5 6076203 6080368 Pvu5g0525 5 6076203 6080368 ECH