Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0510 ATGGAGGAGACTGGCGGCACACCCCGCCGGAGGGAACCACTTCTGACGGCAGCGGAGGGAGAGGTTGCAAAAGCTTCGTGGAGACTTAACTTGAACGAGTTTCGTTTGCCAAGCCAAACAGATGATCATCAACGTAAACGACCCTTCACTTTTCACAGCCTTCTTCGTAAACCAAGGAAGCAACGGAAAGTGGCAGAATATTACAAGCAGCAGGAAAGACTCCTTGAAGGATTTACTGAGATGGAGACTATAACTGAAACGGGTGGTTTCCCTGGAGCTCTCTCTGAGGATGAAATGAAGCAACTAGCAAAGAGTGAGAGAATGGCTATTCATGCCTCAAATATTTGTAACTTGGTGCTGTTTGTTGCAAAGGTTTATGCCTCAATTGCGAGCAGATCATTGGCAGTCATTGCCTCAACCATGGACTCTCTCTTAGATCTCTTGTCAGGGTTCATATTATGGTTTACTGCTCATGCCATGAAAAACCCAAACCAATTTCACTATCCAATTGGAAAGAAACGCATGCAGCCATTGGGTATCATTGTTTTTGCATCAGTAATGGCAACTTTGGGGTTGCAGATTTTGATTGAATCTGCCCGAGAACTTATTTCCAAGTCTAAGCCTAACATGGATCCAACAAAACTGCATTGGATGATCGGGATTATGGTGGGTGTGACTATAGTGAAGTTCATTCTCATGGTCTACTGCAGAAGATTTAAAAATGAAATCGTTAGAGCGTATGCACAAGATCACTTTTTTGATGTGATTACTAATTCTGTTGGATTAGCTGCTGCTGTTTTAGCTGTCAAGTTCTACTGGTGGATTGATCCAACAGGAGCTATAATTATAGCACTGTATACAATTAACACATGGGCCAGGACAGTGGTTGAGAATGTTTGGTCACTCATTGGAAGGACAGCACCACCTGATTTTCTGGCCAAGTTAACTTACCTCATATGGAATCATCATGAGCAGATTAAGCATATAGATACTGTTAGAGCATACACCTTTGGTGCACATTACTTTGTGGAAGTTGACATTGTGCTGCCAGAAGACATGGTTCTCCATCAAGCACACAACATTGGTGAGACACTCCAGGAGAAGCTAGAGCAACTTCCAGATGTTGAGAGGGCTTTTGTGCACATAGATTTTGAGTTCACTCACAGGCCAGAGCACAAGACCATGGTGTGA 1191 0.4349 MEETGGTPRRREPLLTAAEGEVAKASWRLNLNEFRLPSQTDDHQRKRPFTFHSLLRKPRKQRKVAEYYKQQERLLEGFTEMETITETGGFPGALSEDEMKQLAKSERMAIHASNICNLVLFVAKVYASIASRSLAVIASTMDSLLDLLSGFILWFTAHAMKNPNQFHYPIGKKRMQPLGIIVFASVMATLGLQILIESARELISKSKPNMDPTKLHWMIGIMVGVTIVKFILMVYCRRFKNEIVRAYAQDHFFDVITNSVGLAAAVLAVKFYWWIDPTGAIIIALYTINTWARTVVENVWSLIGRTAPPDFLAKLTYLIWNHHEQIKHIDTVRAYTFGAHYFVEVDIVLPEDMVLHQAHNIGETLQEKLEQLPDVERAFVHIDFEFTHRPEHKTMV* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0510 396 Gene3D Cation efflux protein, cytoplasmic domain 307 384 IPR036837 -
Pvu5g0510 396 PANTHER MITOCHONDRIAL METAL TRANSPORTER 1-RELATED 20 396 - -
Pvu5g0510 396 Pfam Dimerisation domain of Zinc Transporter 309 383 IPR027470 -
Pvu5g0510 396 PANTHER METAL TOLERANCE PROTEIN 9 20 396 - -
Pvu5g0510 396 Gene3D Cation efflux protein transmembrane domain 107 302 IPR027469 -
Pvu5g0510 396 Pfam Cation efflux family 112 302 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Pvu5g0510 396 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 307 383 IPR036837 -
Pvu5g0510 396 SUPERFAMILY Cation efflux protein transmembrane domain-like 105 304 IPR027469 -
Pvu5g0510 396 TIGRFAM CDF: cation diffusion facilitator family transporter 111 383 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0510 Pvu-Chr5 5702444 5706126 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0510 5 5702444 5706126 Pvu5g0510 5 5702444 5706126 ECH
Pvu5g0510 5 5702444 5706126 Pvu11g1858 11 45380928 45388352 PCT