Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0378 ATGGGAGAGTGGAGGAACACGTCAGAAAGGTGTGAGAAAAGTAAGGGGCAGAGGGAAATTGCAACAGTAACAACGCGAAGAAAGGAGGAAGTTGGAGAAATTGGTAATTTGGGCCGCCAGAGTATGAAGGAAAGAGAAAGGGAAAGAAAGAAAAAGAAAAGAAAGAAATGTTTGATACGCGTCTCTATGAGGCCCATATTCCATTGCCATTACCGACCTCACAACTCATCGCAACACCTTCAAATCCCCCTCTCCTTTCTCTCGCTCCTCTTCGCAACCCATCCACCACAATCACAACCCTTTTCTCCTTTCTCTCTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCCCTTTTTCTCTCATACGCAAAACCTAACTCTCTTTTCTTCTTCCTCCATGGCTCAGAAAACCGAAAACGAAGAAACCGAGTTCAAGGTTCCCGAAACTATTACTCTCTGCGTTAACAACTGCGGCGTCACCGGGAACCCCGCCACCAACAACATGTGCCAGAACTGCTTTACCGCTTTCACCGCCTCCACCGCCACAACCTCATCCGCCGCCTCTGCCGGAATCTCCTCGCCCTCCGCTAGATCCGTTGCTTCCGCGCGTCCTCAGAAGAGATCCTTCCCCGAAGAGCCTTCTTCGGCTGCAGATCCTCCCTCCTCCGACCAAAACGCGCCGTCCGAGGCCAAACGCGTCGTCAACCGCTGCTCCGGTTGCCGGCGGAAGGTTGGACTCACCGGATTCCGATGCCGGTGCGGCGACCTCTTCTGCGCGGAGCATCGGTACTCCGACCGCCACGACTGCAGTTACGACTACAAAGCCGCCGGAAGAGAAGCCATCGCCAGGGAGAATCCGGTGGTCAGAGCCGCCAAGATTGTTAAAGTCTGA 906 0.5331 MGEWRNTSERCEKSKGQREIATVTTRRKEEVGEIGNLGRQSMKERERERKKKKRKKCLIRVSMRPIFHCHYRPHNSSQHLQIPLSFLSLLFATHPPQSQPFSPFSLLLSLSLSLSLSLSFSPFFSHTQNLTLFSSSSMAQKTENEETEFKVPETITLCVNNCGVTGNPATNNMCQNCFTAFTASTATTSSAASAGISSPSARSVASARPQKRSFPEEPSSAADPPSSDQNAPSEAKRVVNRCSGCRRKVGLTGFRCRCGDLFCAEHRYSDRHDCSYDYKAAGREAIARENPVVRAAKIVKV* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0378 301 ProSiteProfiles Zinc finger AN1-type profile. 236 282 IPR000058 GO:0008270
Pvu5g0378 301 ProSiteProfiles Zinc finger A20-type profile. 152 186 IPR002653 GO:0003677|GO:0008270
Pvu5g0378 301 MobiDBLite consensus disorder prediction 192 207 - -
Pvu5g0378 301 Gene3D - 136 205 - -
Pvu5g0378 301 SMART A20_3 155 179 IPR002653 GO:0003677|GO:0008270
Pvu5g0378 301 MobiDBLite consensus disorder prediction 192 234 - -
Pvu5g0378 301 SMART AN1_Zf_4 242 279 IPR000058 GO:0008270
Pvu5g0378 301 Gene3D - 216 297 IPR035896 -
Pvu5g0378 301 MobiDBLite consensus disorder prediction 1 45 - -
Pvu5g0378 301 SUPERFAMILY AN1-like Zinc finger 227 295 IPR035896 -
Pvu5g0378 301 MobiDBLite consensus disorder prediction 220 234 - -
Pvu5g0378 301 PANTHER AN1-TYPE ZINC FINGER PROTEIN 138 301 - -
Pvu5g0378 301 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 5 138 301 - -
Pvu5g0378 301 Pfam A20-like zinc finger 157 178 IPR002653 GO:0003677|GO:0008270
Pvu5g0378 301 MobiDBLite consensus disorder prediction 1 54 - -
Pvu5g0378 301 Pfam AN1-like Zinc finger 242 279 IPR000058 GO:0008270
Pvu5g0378 301 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 157 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0378 Pvu-Chr5 3477914 3480613 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0378 5 3477914 3480613 Pvu11g2208 11 49712718 49713686 ECH
Pvu5g0378 5 3477914 3480613 Pvu5g0378 5 3477914 3480613 ECH