Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0229 ATGGACGAAAATGGTAGCTCAAGTAGTGAACCCAAGAACAAGAGAAACCTGCCTGTCTCAGTTTTCTTCAAAGATGCAAGACATGTTTTCAAGATGGACTCCATTGGCAAGGAGATACTTGGGATTGCATTCCCATCTGCACTGGCTGTTGCTGCTGATCCTATTGCTTCTCTCATAGACACAGCATTCATTGGCCACTTGGGACCCGTAGAGCTTGCTGCAGCAGGAGTGGCCATAGCTTTGTTCAACCAAGCTTCAAGAATTACCATCTTCCCTTTGGTTAGCATCACAACTTCCTTTGTGGCTGAGGAAAATACCATCGAAAGAATCAATAGAGACAAGAATTTGACTGAAAACATTAAGGCCAAGTCCAAGGAAGTAAGGCCTGAAGATCATCCGATTCAAGATATAGAGAAAGGAGCATCCAAGGAACACAATGAAACTCCAACAGAATCTTCATCTTCAAGAAGTGCCACAAGTGAGCTCGTGCCAAAAGGTTGTGCTCCTGAGAATGTGGAAATGGATGATTGCAATACAAGTACAAGCAAATCTACCTCTGCTAGTAGTGGTAACAAGAGTATGTCAAAAGCTGGAAGGAAGAAGCAACACGTTGCTTCTGCATCAACGGCACTACTTTTTGGCACAATCCTTGGTCTCCTTCAAGCAGTAACCCTTATATTTGCAGCCAAACCTCTATTAGCTGCAATGGGTCTGAAACCTGATTCTCCTATGCTAAATCCAGCTGTTAAATACTTGAGATTGAGATCTTTAGGTGCCCCTGCAGTGCTTCTCTCCTTGGCCATGCAAGGAATCTTTCGAGGATTCAAGGACACTACAACTCCTTTATATGTTATTGTTTCGGGGTATGCATTGAATGTGGCTTTGGATCCAATTCTTATCTTCTACTGCAAAATGGGCATCAAAGGTGCTGCCATTTCACATGTTCTCTCTCAGTATGTGATGGCAGTGGCCCTCTTGTTGATATTAACTAGAAAAGTGGATCTGGTACCTCCAAGTATTAAGGACTTGCAGATTTTCAGGTTTCTTAAAAATGGAGGTCTTTTGTTGGCAAGAGTTGTAGCTGTGACATTCTGCCAAACCTTGGCAGCCTCATTGGCAGCAAGGTTTGGCCCAATTCCTATGGCTGCTTTCCAAACCTGCTTGCAAGTGTGGCTCACATCTTCTCTTCTTGCTGATGGTTTAGCTGTTGCTGTACAGGCAATTCTAGCTTGTTCCTTTGCTGAGAAAGATTATGGAAAGGTGATTGCTACTGCAACACGAACACTACAGATGGGTTTTGTTTTAGGAGTTGGACTCTCTTTTGCAGTTGGAGTTGGCTTATACTTTGGAGCTGGACTCTTCTCCAAAAATGAGCTTGTTGTGCACTTAATCAGAATAGGCCTCCCGTTTGTTGCTGCAACACAACCAATCAATTCATTAGCCTTTGTCTTTGATGGTGTGAACTATGGTGCTTCTGATTTTGCATATTCTGCATACTCCTTGGCAAGATGGGAACAGGAACAGGACCATGGCGTTTTCTGA 1542 0.4345 MDENGSSSSEPKNKRNLPVSVFFKDARHVFKMDSIGKEILGIAFPSALAVAADPIASLIDTAFIGHLGPVELAAAGVAIALFNQASRITIFPLVSITTSFVAEENTIERINRDKNLTENIKAKSKEVRPEDHPIQDIEKGASKEHNETPTESSSSRSATSELVPKGCAPENVEMDDCNTSTSKSTSASSGNKSMSKAGRKKQHVASASTALLFGTILGLLQAVTLIFAAKPLLAAMGLKPDSPMLNPAVKYLRLRSLGAPAVLLSLAMQGIFRGFKDTTTPLYVIVSGYALNVALDPILIFYCKMGIKGAAISHVLSQYVMAVALLLILTRKVDLVPPSIKDLQIFRFLKNGGLLLARVVAVTFCQTLAASLAARFGPIPMAAFQTCLQVWLTSSLLADGLAVAVQAILACSFAEKDYGKVIATATRTLQMGFVLGVGLSFAVGVGLYFGAGLFSKNELVVHLIRIGLPFVAATQPINSLAFVFDGVNYGASDFAYSAYSLARWEQEQDHGVF* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0229 513 PANTHER PROTEIN DETOXIFICATION 12 501 - -
Pvu5g0229 513 TIGRFAM matE: MATE efflux family protein 45 501 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu5g0229 513 CDD MATE_DinF_like 37 502 IPR044644 -
Pvu5g0229 513 MobiDBLite consensus disorder prediction 174 195 - -
Pvu5g0229 513 MobiDBLite consensus disorder prediction 121 150 - -
Pvu5g0229 513 Pfam MatE 359 500 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu5g0229 513 Pfam MatE 197 298 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu5g0229 513 MobiDBLite consensus disorder prediction 121 200 - -
Pvu5g0229 513 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 12 501 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0229 Pvu-Chr5 1934196 1942723 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0229 5 1934196 1942723 Pvu11g2203 11 49577525 49585415 ECH
Pvu5g0229 5 1934196 1942723 Pvu5g0229 5 1934196 1942723 ECH
Pvu11g2203 11 49577525 49585415 Pvu5g0229 5 1934196 1942723 PCT