Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0217 ATGGTGGATCAGGTCCAACACCCTACAATCATGGACAAGGTTGCTGGCCAGCTCCATCTCCGTTCTGGTTTTTCATCTGGTATTAAGAGTTATGATGGAGCTTACCGCCACCCTGCCATGTACCAAAGACCCTCCTTTGGGAACTACTCGAATGCTGCATTGATGCCCTCATGCAAAACTACTATGGATTTATCTGCTGCTGTAGCAACACCATCCCCTGTATTTGTTGCAGCCCCAGCAGAGAAAGGGCATTTTCTTATTGACTTTCTCATGGGAGGTGTTTCAGCAGCTGTCTCAAAAACTGCTGCTGCCCCCATTGAACGTGTTAAGCTTCTGATCCAGAACCAGGATGAAATGCTCAAAACTGGAAGGCTTTCTGAGCCCTACAAGGGTATTGGTGATTGTTTTAAAAGAACAATGGCTGAAGAGGGTGCTGTTTCTCTATGGAGAGGAAACACTGCAAATGTCATCCGTTATTTCCCCACTCAGGCTTTGAACTTTGCATTTAAGGACTATTTCAAGAGGCTTTTCAATTTCAAGAAGGACAGAGATGGCTACTGGAAGTGGTTTGCTGGTAACTTGGCCTCTGGAGGTGCTGCTGGTGCATCGTCCCTTTTATTTGTTTACTCTCTTGACTATGCCCGTACCCGTCTTGCCAATGATGCTAAGGCTGCAAAGAAGGGTGGAGAGAGACAATTCAAAGGTCTTGTTGATGTCTACAGGAAGACATTGGCATCTGATGGTGTTGCTGGTCTCTACCGTGGTTTTAACCTCTCATGTGTTGGAATCATCGTGTATCGTGGTCTGTATTTTGGATTGTACGATTCCGTGAAACCAGTTGTCCTCACCGGATCATTGCAGGATAGCTTTTTCGCCAGCTTTGCCCTTGGATGGCTCATCACCAATGGTGCAGGTCTTGCATCATACCCAATTGACACAGTGAGAAGAAGAATGATGATGACCTCTGGGGAAGCAGTGAAGTACAAGAGTTCCTTGGATGCATTCCAACAAATCGTCAAGAATGAGGGTGCCAAGTCCTTGTTCAAGGGTGCTGGTGCCAACATCCTCAGAGCTGTTGCAGGTGCTGGTGTGCTTGCTGGGTATGACAAGATGCAGGTTCTTGTGTTCGGCAAGAAGTATGGTTCTGGTGGTGCTTAA 1158 0.468 MVDQVQHPTIMDKVAGQLHLRSGFSSGIKSYDGAYRHPAMYQRPSFGNYSNAALMPSCKTTMDLSAAVATPSPVFVAAPAEKGHFLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKTGRLSEPYKGIGDCFKRTMAEEGAVSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFKGLVDVYRKTLASDGVAGLYRGFNLSCVGIIVYRGLYFGLYDSVKPVVLTGSLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFQQIVKNEGAKSLFKGAGANILRAVAGAGVLAGYDKMQVLVFGKKYGSGGA* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0217 385 Pfam Mitochondrial carrier protein 187 282 IPR018108 -
Pvu5g0217 385 Pfam Mitochondrial carrier protein 84 180 IPR018108 -
Pvu5g0217 385 Pfam Mitochondrial carrier protein 289 376 IPR018108 -
Pvu5g0217 385 ProSiteProfiles Solute carrier (Solcar) repeat profile. 188 280 IPR018108 -
Pvu5g0217 385 ProSiteProfiles Solute carrier (Solcar) repeat profile. 83 176 IPR018108 -
Pvu5g0217 385 ProSiteProfiles Solute carrier (Solcar) repeat profile. 288 374 IPR018108 -
Pvu5g0217 385 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 2 385 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pvu5g0217 385 Gene3D Mitochondrial carrier domain 86 381 IPR023395 -
Pvu5g0217 385 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 2 385 - -
Pvu5g0217 385 PRINTS Mitochondrial carrier protein signature 88 101 IPR002067 GO:0055085
Pvu5g0217 385 PRINTS Mitochondrial carrier protein signature 101 115 IPR002067 GO:0055085
Pvu5g0217 385 PRINTS Mitochondrial carrier protein signature 151 171 IPR002067 GO:0055085
Pvu5g0217 385 PRINTS Mitochondrial carrier protein signature 203 221 IPR002067 GO:0055085
Pvu5g0217 385 PRINTS Mitochondrial carrier protein signature 253 271 IPR002067 GO:0055085
Pvu5g0217 385 PRINTS Mitochondrial carrier protein signature 297 319 IPR002067 GO:0055085
Pvu5g0217 385 PRINTS Adenine nucleotide translocator signature 85 97 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pvu5g0217 385 PRINTS Adenine nucleotide translocator signature 129 150 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pvu5g0217 385 PRINTS Adenine nucleotide translocator signature 162 174 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pvu5g0217 385 PRINTS Adenine nucleotide translocator signature 188 201 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pvu5g0217 385 PRINTS Adenine nucleotide translocator signature 293 309 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pvu5g0217 385 SUPERFAMILY Mitochondrial carrier 84 370 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0217 Pvu-Chr5 1787411 1790965 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0217 5 1787411 1790965 Pvu11g2217 11 49770875 49773821 ECH
Pvu5g0217 5 1787411 1790965 Pvu5g0217 5 1787411 1790965 ECH