Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0180 ATGAGTGCAGCTGAAGATCTTGTGAACAAAACAGAATGTGGGAAAGAAAGCCAGGAAAACCACACCACAGGTCCTACTGAAAATCCTGTAAAACATAATGATGCTTTTTTTGAAAATCCTGTAAATGACCATGCAACTGGTGGGGTAGAAAGACCTGTAAGTTTCCTAACAGACATGGAACGAAATCCTACAAGTGAACAAGTGGGTATTGCAGGAAATATGGTAAACAACCTAGCAGGTGTTGCAGAAACTCCCGCAAAGGAACACGTAGCAGGTGGTGCAGAAAATTTTGTACCCAATGAAGCAGGTCTATCAGAAAGTGGTGTGAATTACCAAGCTGGTGGTGTAGAAAGTCCTATAAGCAACATTGTAGAAAGTCATACAAGCAACATTGTAGAAAGTCCTATAAACAACATTGTAGATGCTGCAGACATTTCTTTAAGCAACCAAGCAGATGCTACAAGAAACAGCAAAGAAAATGCTGTTGAAACCCCTGTAGCCTGCAAAGCAGATCGCCTTCCGGAAGAAGCACAGGAGATACTGAAATCATTGGCTAGTCACTGGGACGATGTACTTGATGAAAATGCATTGCAGGTGTTCCCTCTCAAAGGAGCAATGACAAATGAGGTATTCCAGATAAAGTGGCCAACTTTGACTGGAGAAACGTCACGAAAGGTTATTGTCAGAATTTATGGTGAGGGTGTGGACGTGTTCTTTGATAGGAGTCATGAGATTCAAACATTTGAATTTATGTCAAAGAGCGGGCAAGGTCCTCGTCTACTAGGACGATTTACTAATGGTCGTGTTGAAGAGTTTATCCATGCACGGACATTAACAGCATCTGATCTACGTGATCCATCCATTTCTGCTCTTATAGCAGCCAAATTGAAGGATTTTCATGATTTAGATATGCCTGGAGAAAAGCAAGTCTACCTTTGGGATACATTGCGAAATTGGCTTAGTGAAGCCAAACGTTTATCATCCCCTAAAGAAGTTGAAGCATTTTATTTGGACACAATAGACAAAGAAATCGCCATTTTGGAAAAGGAACTATCAGGCGCACACCAAATGATAGGATTTTGTCACAATGATTTACAATATGGTAACATAATGCTTGATGAAGAGACCAATTCTGTGACCATCATAGACTATGAATACGCAAGCTATAATCCAGTAGCATTTGATATAGCCAACCACTTCTGTGAGATGGCTGCTAACTATCATGCAGAAGAGCCTCATATCCTTGACTACAATAAATATCCTGATTTGGACGAGCGTCAAAGATTTGTGTTGGCATACTTGAGTACCTCTGGTCAACAGTGCAGTGACAATGAAGTGGAGCAGCTACTTCAAGAAATTGAAAAGTATACACTTGCAAATCATCTATTCTGGGGCGTTTGGGGAATAATCTCGGCACAAGTAAACACAATTGAATTTGACTACAAGGAGTATGCTAAACAGAGGTTTCAAGAGTACTGGGCAAGGAAACCTTATCTTTTAATAAACTCTGAAGCACCTTCTCCGTATAATGTGCCCGAAGGTACAGGTATTTGA 1554 0.406 MSAAEDLVNKTECGKESQENHTTGPTENPVKHNDAFFENPVNDHATGGVERPVSFLTDMERNPTSEQVGIAGNMVNNLAGVAETPAKEHVAGGAENFVPNEAGLSESGVNYQAGGVESPISNIVESHTSNIVESPINNIVDAADISLSNQADATRNSKENAVETPVACKADRLPEEAQEILKSLASHWDDVLDENALQVFPLKGAMTNEVFQIKWPTLTGETSRKVIVRIYGEGVDVFFDRSHEIQTFEFMSKSGQGPRLLGRFTNGRVEEFIHARTLTASDLRDPSISALIAAKLKDFHDLDMPGEKQVYLWDTLRNWLSEAKRLSSPKEVEAFYLDTIDKEIAILEKELSGAHQMIGFCHNDLQYGNIMLDEETNSVTIIDYEYASYNPVAFDIANHFCEMAANYHAEEPHILDYNKYPDLDERQRFVLAYLSTSGQQCSDNEVEQLLQEIEKYTLANHLFWGVWGIISAQVNTIEFDYKEYAKQRFQEYWARKPYLLINSEAPSPYNVPEGTGI* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0180 517 Gene3D - 232 493 - -
Pvu5g0180 517 Gene3D Phosphorylase Kinase; domain 1 185 272 - -
Pvu5g0180 517 CDD ETNK_euk 197 495 - -
Pvu5g0180 517 MobiDBLite consensus disorder prediction 1 32 - -
Pvu5g0180 517 PANTHER CHOLINE/ETHANOALAMINE KINASE 161 508 - -
Pvu5g0180 517 Pfam Choline/ethanolamine kinase 223 423 - -
Pvu5g0180 517 SUPERFAMILY Protein kinase-like (PK-like) 170 500 IPR011009 -
Pvu5g0180 517 PANTHER CHOLINE KINASE 2-RELATED 161 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0180 Pvu-Chr5 1498898 1504517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0180 161 504 Acyl Lipid Metabolism Gene Families AT1G74320 64.244 2.92e-171 485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0180 5 1498898 1504517 Pvu5g0180 5 1498898 1504517 ECH
Pvu5g0180 5 1498898 1504517 Pvu11g2051 11 47383743 47389219 PCT