Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0169 ATGGCCACTGAAAAGCCTAGGTTTTGTGCAAACTTCCTTGAGAACTCTAAACACTACTTTGCCATGATTGCTCTGCAATTTGGCTATGCAGGCATGAACATCATCACCAAGGTTTCCCTCAACCGTGGGATGAGCCACTATGTTCTTGTTGTTTATCGCCATGCCTTTGCCACTGCTGTCATAGCTCCATTTGCCTTCATCTTTGAAAGGAAAGCTCAACCAAGGATAACATTCAAAATTTTCATGCAAATTTTCATCCTGGCTCTACTTGGGCCTGTGATTGATCAAAACTTCTACTACGCTGGGTTGAAATTAACATCCCCAACCTTCTCCTGTGCAATGAGCAACATGCTTCCTGCCATGACTTTTGTAATGTCAGTTTTATGCAGGATGGAGAAGATGAACATGAAGAAGGTGAGGTGCCAAGCAAAGGTGATTGGAACATTGATGACTGTGGGTGGGGCCATGTTGATGACCTTATACAAAGGACCTCAAGTGGAAATAGTTTGGACCAAACATGCCCTTAATCATCAAAGTCAAATCAATAATAATAGTTCAACAACACCTTCAGACAAAGATTGGCTCATTGGCTCCATTTTCTTAATCATTGCCACACTTGCTTGGGCATCCCTCTTTGTTTTACAAGCCAAAGCCATTGAAACCTACAAAAGTCACCAGCTAAGCCTCACAACACTGATATGCTTCATAGGCACTGTTCAAGCTACTGCTGTTACTTTTGTTATGGAACACAATCCTTCAGTCTGGACAATTGGTTGGGATATGAACTTACTTGCTGCTGCCTATGCTGGAATTGTTACATCAAGCATATCATACTATGTTCAAGGATTGGTAATTAAGAAGAGAGGACCTGTTTTTGCAACTGCATTTAGCCCTCTCATGATGATCATTGTAGCCTTCATGGGTTCCTTTATCCTTGCAGAACACATTTTTCTTGGAGGTGTTCTTGGTGGGATCTTGATTGTAATAGGGTTATATTCAGTTCTTTGGGGAAAGCAGAAAGAAGAAGTGGTGGAGGATATTCCATTGGCTTTAAAGGCTCCAATGGTTGAAGCAAATTCAGATTCCAACAACACCTCTTCACATCTCATCAATCTCACCAATCAACCTCCATTCAAATCTAACAGTTAA 1149 0.4134 MATEKPRFCANFLENSKHYFAMIALQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFAFIFERKAQPRITFKIFMQIFILALLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFVMSVLCRMEKMNMKKVRCQAKVIGTLMTVGGAMLMTLYKGPQVEIVWTKHALNHQSQINNNSSTTPSDKDWLIGSIFLIIATLAWASLFVLQAKAIETYKSHQLSLTTLICFIGTVQATAVTFVMEHNPSVWTIGWDMNLLAAAYAGIVTSSISYYVQGLVIKKRGPVFATAFSPLMMIIVAFMGSFILAEHIFLGGVLGGILIVIGLYSVLWGKQKEEVVEDIPLALKAPMVEANSDSNNTSSHLINLTNQPPFKSNS* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0169 382 MobiDBLite consensus disorder prediction 360 382 - -
Pvu5g0169 382 Pfam EamA-like transporter family 19 159 IPR000620 GO:0016020|GO:0016021
Pvu5g0169 382 Pfam EamA-like transporter family 196 335 IPR000620 GO:0016020|GO:0016021
Pvu5g0169 382 PANTHER WAT1-RELATED PROTEIN 12 363 - -
Pvu5g0169 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
Pvu5g0169 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 340 - -
Pvu5g0169 382 PANTHER WAT1-RELATED PROTEIN 12 363 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0169 Pvu-Chr5 1406829 1411481 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0169 1 350 Nodulin-like Gene Family AT5G07050 74.432 0.0 527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0169 5 1406829 1411481 Pvu5g0169 5 1406829 1411481 ECH
Pvu5g0169 5 1406829 1411481 Pvu11g2048 11 47341552 47344536 PCT