Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0158 ATGATCTATCAATGGTTGTTCATCATCAAATTGGTGTACCTTGTTTGCTTTGTTGCTGGTCAGAACAGTAGCAACTCACAACCACTTGATTATAGATATGCTTGTTTGGACCAATCTTCTGTTCCTCCCTCTGCTGCTTACAAAACCAACATCAACAATTTGTTCACTTCCCTCTCATCTGATTCTGCTACCAGCAATGGTTTTGGGAATGGAACTTCAGGTATTGATCAAGACATGGTTTATGGACTCTACCTTTGCCGTGGTGATGTGAACACCAGCCTTTGCCACTCATGTGTTCAAAACTCTAGCATCTTGGTCATGCAGCACTGCCCCAACAATGCCTCAGCTATTTTATGGTACCCCTTTTGTCTTGTGAGGTACTCAAACCAGAATTTCTTTGGCAACCTCACCATTCGGCCAAGGATTCCTATGTTTGATGCCACACAGAATTTCACCAGTGCTGGAGAATATGACAGTGATGCTCAGGTTCTGATGAATGGTTTGATACAAATAGGGTCAGAGGCACCCTTGATGTTTGGGACACATATGTTCAACATAAATGGCACTCAAAGAAGGTATGGTTGGGTGCAGTGCAGCAGAGATATTACACCTGAGGAATGCAGAACATGTTTGAGCAACATGCTTGAGGATGTTGAAAATTGTTGTCAGGAAAAGAAGGTGTGGCGTGTCTTTTCTCCAAGTTGTATTGTGATGTATGAAACTCAACCTTTCTTCTCGAATGGTACTGATTCTGCTCCAGCACCTCAGCAAGATAATGAAGCCACAGATGGGAATAGCAGAAGGTGGTGGGTTATAGTAATCATTGCTGTAGCTGGAACTGTAGCACTAGCTCTATTGGCTATCAGCATATACTACTGCTACTTGAAAAGGAAAAAAGATAAACAAAGTATACAAGAGGAGGGACTAAATTCAATTTTTTCTCAAGAACAAACAGATAGGGAGGAGAGTATGAACACTGACTTTCCTATGATGCCTCTGAGTACTATTCTAAAATGTACAAACAACTTTTCTGAGGAACAAAAACTGGGGAAAGGTGGATTTGGACCTGTCTATAAGGGTACATTACCAGATGGAAGACAAATTGCTGTTAAAAGGCTTTCAAAAACTTCAGTTCAAGGTGGTGAGGAATTCAAGAATGAAATCATATTGATTGCAAAATTGCAGCATCGCAACCTTGTGAGACTGTTGGCTGGCTGTGTTGAGCAAAATGAAAAGCTGCTAGTCTATGAATACATGCCAAATTCAAGCCTTGATTTCCACCTATTTGATACCAACAAGGGTGTCCATCTGAATTGGATAAACCGATTAAACATTATAAATGGGATTGCTAAAGGGCTTCTATATCTACATGAAGACTCAAGACTGAGGGTTATTCACAGAGACCTGAAAGCTAGCAACATTCTTCTAGATCATGAAATGAATCCCAAAATCTCAGACTTTGGATTGGCAAGAACATTTGGAGGAGACCAGAAGCAGGCAAACACAATTAGAGTTGTTGGAACTTATGGATACATGGCTCCAGAGTATGCTATGGAAGGTTTGTTTTCAGTGAAGTCAGATGTTTTCAGCTTTGGTGTTCTTTTGTTAGAGATCATCAGTGGAAAAAGGAACAGTAAATTCTATCTGTCAGACCAAGGCCAAAGTCTTCTCGTATATGCATGGAACCTGTGGTGTGAAAGCAAAGGGTTGGAATTGATGGATCCATCAATAGAAAAATCAAGTGTACACAGTGAAGTTGTAAAGTGTATGCAGATTGGACTACTGTGTGTGCAAGAAGATGCAGCAGATAGACCAACAATGTCAAGTGTTGTTCATATGCTTGCAAGTGACACAATGAGTCTTCCCAACCCCACACGCCCTGCATTTTCTGTTGGAAGAACAGTCATTGAACAAGAGTCTTCATCAAACACTTCTATGCAATACTCTGTCAATGAAGTAACAGTGTCTGAAGTGATACCAAGGTGA 1986 0.4079 MIYQWLFIIKLVYLVCFVAGQNSSNSQPLDYRYACLDQSSVPPSAAYKTNINNLFTSLSSDSATSNGFGNGTSGIDQDMVYGLYLCRGDVNTSLCHSCVQNSSILVMQHCPNNASAILWYPFCLVRYSNQNFFGNLTIRPRIPMFDATQNFTSAGEYDSDAQVLMNGLIQIGSEAPLMFGTHMFNINGTQRRYGWVQCSRDITPEECRTCLSNMLEDVENCCQEKKVWRVFSPSCIVMYETQPFFSNGTDSAPAPQQDNEATDGNSRRWWVIVIIAVAGTVALALLAISIYYCYLKRKKDKQSIQEEGLNSIFSQEQTDREESMNTDFPMMPLSTILKCTNNFSEEQKLGKGGFGPVYKGTLPDGRQIAVKRLSKTSVQGGEEFKNEIILIAKLQHRNLVRLLAGCVEQNEKLLVYEYMPNSSLDFHLFDTNKGVHLNWINRLNIINGIAKGLLYLHEDSRLRVIHRDLKASNILLDHEMNPKISDFGLARTFGGDQKQANTIRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVLLLEIISGKRNSKFYLSDQGQSLLVYAWNLWCESKGLELMDPSIEKSSVHSEVVKCMQIGLLCVQEDAADRPTMSSVVHMLASDTMSLPNPTRPAFSVGRTVIEQESSSNTSMQYSVNEVTVSEVIPR* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0158 661 ProSiteProfiles Protein kinase domain profile. 343 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0158 661 Pfam Salt stress response/antifungal 40 130 IPR002902 -
Pvu5g0158 661 Pfam Salt stress response/antifungal 149 241 IPR002902 -
Pvu5g0158 661 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 25 658 - -
Pvu5g0158 661 Gene3D Phosphorylase Kinase; domain 1 304 418 - -
Pvu5g0158 661 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 25 658 - -
Pvu5g0158 661 Pfam Protein tyrosine and serine/threonine kinase 346 614 IPR001245 GO:0004672|GO:0006468
Pvu5g0158 661 ProSiteProfiles Gnk2-homologous domain profile. 29 132 IPR002902 -
Pvu5g0158 661 SUPERFAMILY Protein kinase-like (PK-like) 326 646 IPR011009 -
Pvu5g0158 661 SMART serkin_6 343 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0158 661 Gene3D - 143 244 IPR038408 -
Pvu5g0158 661 Gene3D - 29 132 IPR038408 -
Pvu5g0158 661 ProSiteProfiles Gnk2-homologous domain profile. 139 244 IPR002902 -
Pvu5g0158 661 Pfam Domain of unknown function (DUF3403) 616 661 IPR021820 GO:0004674
Pvu5g0158 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Pvu5g0158 661 Gene3D Transferase(Phosphotransferase) domain 1 419 623 - -
Pvu5g0158 661 CDD STKc_IRAK 349 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0158 Pvu-Chr5 1335454 1339316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0158 26 661 Receptor kinase-like Gene Family AT4G05200 42.042 9.83e-174 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu5g0158 PK_Tyr_Ser-Thr 1.2e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0158 5 1335454 1339316 Pvu11g2025 11 47070216 47078390 PCT
Pvu11g2024 11 47065760 47068779 Pvu5g0158 5 1335454 1339316 PCT