Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0140 ATGTCTAATCCACAAGTTGAACAAGAAAAACAGCACATGAGCAACCATGAAACACACCAAAAGGTTGCACAATCTGTTTGCTCTGTGTGCCATAACAGAAGACCACAGTTTGAAAGAAACAAAAAAAGAGAGTTTTCATATGTTGAGTTGCATGCAGCCACACAAGGTTTTTCCCCTAAGAACTTTCTGTCAGAAGGGGGGTTTGGTTCTGTGTATAAAGGGGAGTTGTGTGGACAGAAGATTGCTGTTAAGCAACACATGTGTGCAAACCGAAAAGGAGAGAAGGAATTCAAGTCTGAAGTTGATGCACTCAGCAAAGCAATACATGAGAATGTGGTGATGCTGTTAGGATCATGCTCAGAAGGAAACCATAGACTTCTTGTGTATGAATATGTCTGCAATGGTTCATTGGACCAACATTTATCACAACATTCTCGTAAACTTCTTAATTGGCAAGACAGGGTGAAAGTAGCTGATGGAGCTGCCAAAGGATTGTTATACCTGCATGAGAATAACATAATACACAGAGATATGACAACAAACAACATTCTTCTTACCCATGATTATGATGTATTGCTAGGGGACTTTGGTTTGGCTAGAACTGTGATTGAAGACTCCTCATACTCTACAGAGTGTGTTGGGAATCTGACTTATATGGCACCAGAATATGCAGAATTTGGAAAAGTGTCAATTAAGACTGATGTGTATTCCTTTGGGGTGGTTCTGCTACAGCTAATAACTGGAATGAGAACCACAGACAAAAGGGTTGCTGATAAAGGTCTGGTGGGATGGGCTAGACCACTACTGAAGGAAGGAAAATGCCAAGCCCTTATTGATGGCAGAATGATCAACTCCCATGATTGCCATCAACTCTATTGGATGAGCCGTTTGGCTGGAAATTGTCTTCAGAGGGATCCCGAAAAGAGATTGCACATGAGTACAGTGGTGAAGGCCTTAAATCAGATAGGCAAAGGTTGTAGCTGCATTGTGAGAAAAGACCATAACCTTCTAATCTCAAGCCCTTCTTCTACCTCAAAAGATCATACAGATTATTCCTCACCATCACAAGAGTGGTCAGAATCACAATGA 1089 0.4123 MSNPQVEQEKQHMSNHETHQKVAQSVCSVCHNRRPQFERNKKREFSYVELHAATQGFSPKNFLSEGGFGSVYKGELCGQKIAVKQHMCANRKGEKEFKSEVDALSKAIHENVVMLLGSCSEGNHRLLVYEYVCNGSLDQHLSQHSRKLLNWQDRVKVADGAAKGLLYLHENNIIHRDMTTNNILLTHDYDVLLGDFGLARTVIEDSSYSTECVGNLTYMAPEYAEFGKVSIKTDVYSFGVVLLQLITGMRTTDKRVADKGLVGWARPLLKEGKCQALIDGRMINSHDCHQLYWMSRLAGNCLQRDPEKRLHMSTVVKALNQIGKGCSCIVRKDHNLLISSPSSTSKDHTDYSSPSQEWSESQ* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0140 362 PIRSF ILK 7 334 - -
Pvu5g0140 362 ProSiteProfiles Protein kinase domain profile. 57 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0140 362 MobiDBLite consensus disorder prediction 340 362 - -
Pvu5g0140 362 Pfam Protein tyrosine and serine/threonine kinase 61 319 IPR001245 GO:0004672|GO:0006468
Pvu5g0140 362 Gene3D Transferase(Phosphotransferase) domain 1 132 335 - -
Pvu5g0140 362 ProSitePatterns Tyrosine protein kinases specific active-site signature. 173 185 IPR008266 GO:0004672|GO:0006468
Pvu5g0140 362 Gene3D Phosphorylase Kinase; domain 1 27 131 - -
Pvu5g0140 362 PANTHER OS01G0253100 PROTEIN 5 343 IPR045271 GO:0004714|GO:0006468
Pvu5g0140 362 SUPERFAMILY Protein kinase-like (PK-like) 43 328 IPR011009 -
Pvu5g0140 362 PANTHER TYROSINE KINASE FAMILY PROTEIN 5 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0140 Pvu-Chr5 1135418 1137664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0140 40 322 Trihelix Transcription Factor Family AT5G38560 44.932 9.63e-79 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Pvu5g0140 PK_Tyr_Ser-Thr 3.1e-50 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0140 5 1135418 1137664 Pvu11g1997 11 46862516 46868576 PCT