Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0129 ATGTCATCCTTCAAATCCTATGGGAAAGTTGATGAGCATGAGCAAAGGGTGTTGGAGACAAGGAGGAAAACCAGGAAGAGAATCACAATCATAGGGTTGTCCTCAATAGTTCTAGCAGGTGTTGTTTTTGCTGCTGTATTTTGCATTCTTGGCAGCACCAACTCCTCAGAAGGTGCCAATGATGCTCACACTGTGACAAATTCAGTGAAGGCTGTTTGTGATGTGACATTGTACAAGGACTCGTGCTATAGCAGCCTTGGTTCTGCTGTGGACTCAAGGCAGCTTCAGCCTCAGGAGCTGTTCATGTTGTCAATGAAGGTGGCCTTATCTGAAGTGTCCAAAGCTGCTGATTATCTCAGTGATCATGGAGTTTTCAATGGGGTGGCGAAGGACAACAGGACTAAGGAGGCTTTCAAAAATTGCAGGGAGCTTTTGGATCTTGCGGTTGACCATCTGAATAGCTCTTTGACATCAGGGGAAAAGTTTTCTCTTCTTGAAGTTTTTGATGATCTTGAAACATGGTTAAGTGCTGCAGGTACATACCAGCAGACTTGTATTGAAGGATTTGAAGATGGAAAAGAAGCAATTAAGAAAAGTGTAGTAAGCTATCTTAAAAATTCTACGCAGTTCACCAGTAACAGTCTTGCCATCATTACATGGATCAACAAGGCTGCAACCACACTGAACCTTAGGCGCTTACTGAGTTTACATCATCAGAATGAAGCACCAGAGTGGCTTCCTTCAAACGATAGGAGGCTCCTTCTGACAGAGGATTTGAGGAAGAAAGCTGACATTGTTGTGGCCAAAGATGGCAGTGGGAAATATAAGAAAATTTCTGATGCACTTAAACATGTTCCTAATGAGAGTAACAAGAGGACTGTGATCTATGTGAAGAGAGGGGTTTACTATGAAAATGTGAGGGTTGAGAAGACCAAATGGAATGTAATGATCATTGGTGATGGAATGACTTCTACTATTGTATCTGCTAGCCTTAACTTTGTGGATGGCACACCAACATTTTCAACAGCAACATTTGCTGTATTTGGAAGGAATTTCATAGCTAGGGATATTGGTTTTCGGAACACTGCTGGTCCACAGAAGCATCAAGCAGTAGCACTAATGACAAGTGCTGATCAAGCAGTTTACTATAGGTGCCACATTGATGCATTTCAGGATACTCTCTATGCTCATTCCAACCGCCAATTCTACAGAGAATGCAACATCTATGGCACTGTTGATTTCATTTTTGGAAATTCTGCTGTTGTGATCCAAAACTGCAATATTAGGCCAAAGTTGCCAATGCATGGCCAGCAAATTACAATCACAGCTCAGGGAAAAACTGACCCTAACATGAACACTGGGATCTCCATTCAGAATTGCAGCATTTCACCCTTTGGTAACTTGAGTTCTGTCCAGACATATCTTGGAAGACCCTGGAAGAATTACTCAACCACCGTGTACATGAAATCCAGAATGGAAGGTTTTGTGAACCCCAAAGGCTGGTTACCATGGACAGGGAACTCTGCTCCAAACACTATTTTCTATGCAGAATTTCAGAATGTTGGACCTGGTTCTTCAACAAAGAATAGGGTGAAGTGGAAGGGTTTGAGAACCATTACCAGTGAACAAGCCAGAAAGTTTACCATCAAGGGTTTTCTACATGGAGATAAATGGATTTCTGCAGCAGGTGCCCCATTTAAGTCTGATCTATGA 1713 0.4232 MSSFKSYGKVDEHEQRVLETRRKTRKRITIIGLSSIVLAGVVFAAVFCILGSTNSSEGANDAHTVTNSVKAVCDVTLYKDSCYSSLGSAVDSRQLQPQELFMLSMKVALSEVSKAADYLSDHGVFNGVAKDNRTKEAFKNCRELLDLAVDHLNSSLTSGEKFSLLEVFDDLETWLSAAGTYQQTCIEGFEDGKEAIKKSVVSYLKNSTQFTSNSLAIITWINKAATTLNLRRLLSLHHQNEAPEWLPSNDRRLLLTEDLRKKADIVVAKDGSGKYKKISDALKHVPNESNKRTVIYVKRGVYYENVRVEKTKWNVMIIGDGMTSTIVSASLNFVDGTPTFSTATFAVFGRNFIARDIGFRNTAGPQKHQAVALMTSADQAVYYRCHIDAFQDTLYAHSNRQFYRECNIYGTVDFIFGNSAVVIQNCNIRPKLPMHGQQITITAQGKTDPNMNTGISIQNCSISPFGNLSSVQTYLGRPWKNYSTTVYMKSRMEGFVNPKGWLPWTGNSAPNTIFYAEFQNVGPGSSTKNRVKWKGLRTITSEQARKFTIKGFLHGDKWISAAGAPFKSDL* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0129 570 Gene3D Invertase/pectin methylesterase inhibitor family protein 65 222 IPR035513 -
Pvu5g0129 570 Gene3D - 259 570 IPR012334 -
Pvu5g0129 570 Pfam Plant invertase/pectin methylesterase inhibitor 68 217 IPR006501 GO:0004857
Pvu5g0129 570 TIGRFAM PME_inhib: pectinesterase inhibitor domain 45 221 IPR006501 GO:0004857
Pvu5g0129 570 PANTHER PECTINESTERASE 5 568 - -
Pvu5g0129 570 SUPERFAMILY Pectin lyase-like 262 567 IPR011050 -
Pvu5g0129 570 Pfam Pectinesterase 264 556 IPR000070 GO:0030599|GO:0042545
Pvu5g0129 570 PANTHER PECTINESTERASE 5 568 - -
Pvu5g0129 570 SMART PMEI_2 64 217 IPR006501 GO:0004857
Pvu5g0129 570 CDD PMEI-like_3 71 223 - -
Pvu5g0129 570 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 67 221 IPR035513 -
Pvu5g0129 570 ProSitePatterns Pectinesterase signature 2. 408 417 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0129 Pvu-Chr5 1022742 1025226 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0129 7 570 Carbohydrate Esterase AT3G10710 57.118 0.0 665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0129 5 1022742 1025226 Pvu11g1965 11 46579156 46581741 PCT