Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0128 ATGCGAACCGTTGGATCAAGCGAATCCAACGCCACACTATATCCAAAACTATGCCGTTCCATTCTCACAGCCATTCGTGCATCCCCTTCTGACCCTTATGGCTATGGCAAGTTCTCCATCAAGCAAAGCCTCAAACAAGCACAGAAACTGGCCAAGGTGTTTGAGGACTTTCTGCAACGCCACCAAGCATCTTCTTCCCTGAACCATGCAGAAGTTGCATCCCTTGCTGACTGCAGAGACCTGAACAACCTGAACGTGGAGTACTTGGCCTCCATATCAGAGGAGCTGAAATCTGCAGGGTCCTCAGAGTCAGACTCTGAGCTGGTTCAGAAGATGGAGAGCTATCTGAGTGCTGTGGCCACCAACCAGTACACCTGCTATGATGGGTTGGTGGTGACCAAAAGCAGCATTGCCAATGCCCTTGCCCTGCCACTCAAGGGTGCCACCCAGTTGTACAGTGTCTCACTTGGGTTGGTCACTCAGGCTCTCGACAAGAATCTCAGAAGAAGCAAGACCCGCAAACATGGACTCCCCACCCCCACCTTCAAGGTTAGGCAACCACTCGAGAAGCTCATCAAGCTTCTTCGCACAAAGTATAGTTGCACCAAGTTATCCAATTGCAGCAGAGCTGGAAGGAATCTTAAAGAAAGCGGAAGCCAAGGAATTTTATTACATGATTTTGTGTTTGTGAGTTCTCATGGAATAGACAATTACACTTCCATTGGAGAGGCTATTGCTGCTGCACCCAATAACACAAAGCCTGAAGATGGATATTTCCTTGTGTATGTTAGGGAGGGAATCTATGAAGAATATGTAGTAATTCCCAAAGAAAAGAAGAATATATTGCTTGTTGGAGATGGTATTAACAAGACTATCATCACAGGGAACCATAGTGTCATAGATGGTTGGACAACTTTCAATTCTTCCACATTTGCTGTTTCTGGAGAAAGGTTTATAGCAGTGGATGTTACATTCAGAAACACAGCTGGACCTGAAAAACACCAAGCAGTGGCAGTGAGGAACAATGCTGACCTCTCTACATTCTACCGTTGCAGTTTTGAAGGATATCAAGACACTCTCTATGTTCACTCTTTGAGGCAATTCTACAGGGAATGTGAAATCTATGGCACTGTGGACTTCATTTTCGGCAATGCAGCCGTGGTCTTCCAAAACAGTAAGATCTATGCCAGAAAACCATTGCCAAACCAGAAGAATGCTGTGACAGCACAAGGAAGAAATGATCCTAATCAGAACACTGGCATTTCAATCCAAAACTGCACCATTGATGCTGCACCAGACTTAGCTATGGACTTGAATTCTACAGCAAGTTACTTAGGCCGGCCATGGAAGGTGTATTCAAGGACCGTCTACCTGCAGTCATATATTGGAAATGTTATTCAACCTGCGGGGTGGTTAGAGTGGAATGGCACAGTTGGGTTAGACACCCTCTTTTATGGTGAGTTTAACAACTATGGACCTGGTTCTAACACTAGCAGTAGAGTACAATGGCCTGGTTACTTTCTGTTGAATGCTACTCAAGCTTGGAACTTCACAGTCCTGAACTTTACTTTGGGAAATACATGGCTTCCTGACACAGATATACCTTACATTGAAGGACTGTTAATATAG 1629 0.4506 MRTVGSSESNATLYPKLCRSILTAIRASPSDPYGYGKFSIKQSLKQAQKLAKVFEDFLQRHQASSSLNHAEVASLADCRDLNNLNVEYLASISEELKSAGSSESDSELVQKMESYLSAVATNQYTCYDGLVVTKSSIANALALPLKGATQLYSVSLGLVTQALDKNLRRSKTRKHGLPTPTFKVRQPLEKLIKLLRTKYSCTKLSNCSRAGRNLKESGSQGILLHDFVFVSSHGIDNYTSIGEAIAAAPNNTKPEDGYFLVYVREGIYEEYVVIPKEKKNILLVGDGINKTIITGNHSVIDGWTTFNSSTFAVSGERFIAVDVTFRNTAGPEKHQAVAVRNNADLSTFYRCSFEGYQDTLYVHSLRQFYRECEIYGTVDFIFGNAAVVFQNSKIYARKPLPNQKNAVTAQGRNDPNQNTGISIQNCTIDAAPDLAMDLNSTASYLGRPWKVYSRTVYLQSYIGNVIQPAGWLEWNGTVGLDTLFYGEFNNYGPGSNTSSRVQWPGYFLLNATQAWNFTVLNFTLGNTWLPDTDIPYIEGLLI* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0128 542 SUPERFAMILY Pectin lyase-like 227 539 IPR011050 -
Pvu5g0128 542 Pfam Plant invertase/pectin methylesterase inhibitor 11 157 IPR006501 GO:0004857
Pvu5g0128 542 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 10 161 IPR035513 -
Pvu5g0128 542 SMART PMEI_2 4 158 IPR006501 GO:0004857
Pvu5g0128 542 PANTHER PECTINESTERASE 6 540 - -
Pvu5g0128 542 ProSitePatterns Pectinesterase signature 2. 374 383 IPR033131 -
Pvu5g0128 542 PANTHER PECTINESTERASE 6 540 - -
Pvu5g0128 542 CDD PMEI-like_3 10 160 - -
Pvu5g0128 542 Gene3D - 226 542 IPR012334 -
Pvu5g0128 542 Gene3D Invertase/pectin methylesterase inhibitor family protein 6 162 IPR035513 -
Pvu5g0128 542 Pfam Pectinesterase 228 525 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0128 Pvu-Chr5 1017804 1022182 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0128 11 541 Carbohydrate Esterase AT3G10720 61.567 0.0 689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0128 5 1017804 1022182 Pvu11g1963 11 46573408 46578971 PCT