Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0122 ATGGCTTCTGGAAGAACACCAAGATCAAGATCAACAAGACCACAAGCTTCCATTCGTCCTCTGTATGAAACCTTTGAGCCCAAGTCAGAGATGAAGGAAGATAAAGCTGCATATTTTCTTCACATTCATCTTCCTGGTTTCGTAAAGGAGAAGATAAAGATAAATTTTGTGAGATCTTCTCGAGTGGTGAGGGTTTCTGGAGAACGATCATTGGGAGGCAATAGAATAAGCAATTTCGAGCAAACATACTCTGTTCCACAAGATTGCGAAGTGGAGAAACTTCAGGGCAAGTATGAACTTGGAACTCTCGTTGTTACAATGCCAAAGAACCCTAATATTTCACCCAAATTGCAATCCAAAACACCACACAAAATTCCTCCATCTCCACTTGTTAGTTCTTCTGAAAAACCTGTGCTTGATCAACCAAAGCTTAAAGAAGTAGTCATGCCTCCAAAATCTCCAATCCCAATAATGGAACAGGGAGAAAAACATGTTGGAGACATGTCACCAAGGCCTAGAAGTGTTCAAGAGGAACCCATGCTGAAATCCTCACCACTTTTTGCTTCAACCCCACTAAAGGAAACAGGGAAATCTCAAAAGGGTCATGAGGAAATTGAGCCAAAACCCACATCAACAATCATGGGTCATGACAGAAAAACAGAACAACATGAGAAGGAGGAGGAAAATAAACAGAATGACATTGCAACATATATAGAAAAAGTGAAGAAGAGAATACATGAAAAGGAAGATAAAGTTGATTGGAATAACCTTGACCAGAGAATAAAGTCAGGTCAGAGATACATCAATCACAATGAGGTTTGGAAAGGAGCAGAGATATTGAAGACAAGACCAAAAGAAGGTGCAGGTTCCATTGCTGCAACAGAGAAGGTAAAAGAAAGCACTGAGAGTAACATTGAGAAAGGAAAGAGAAAAGAGGATGATGAGATGTTCACAATAGGGAAAGGAATGAGAGAAGTGGTTGCTTCAGCTGCAGAGGTAGTCACCAAGATTGGAGAAGGAAAGTTGAATGAAGAAGAAAAGCCTTTGGTTGCAAACATGGGTGCTGCCATTCTTGTGATCATGGCCTTGGGAGCTTATGTGACCTACAAGATCACCTCTTCTACCAAAGCATGA 1134 0.4074 MASGRTPRSRSTRPQASIRPLYETFEPKSEMKEDKAAYFLHIHLPGFVKEKIKINFVRSSRVVRVSGERSLGGNRISNFEQTYSVPQDCEVEKLQGKYELGTLVVTMPKNPNISPKLQSKTPHKIPPSPLVSSSEKPVLDQPKLKEVVMPPKSPIPIMEQGEKHVGDMSPRPRSVQEEPMLKSSPLFASTPLKETGKSQKGHEEIEPKPTSTIMGHDRKTEQHEKEEENKQNDIATYIEKVKKRIHEKEDKVDWNNLDQRIKSGQRYINHNEVWKGAEILKTRPKEGAGSIAATEKVKESTESNIEKGKRKEDDEMFTIGKGMREVVASAAEVVTKIGEGKLNEEEKPLVANMGAAILVIMALGAYVTYKITSSTKA* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0122 377 CDD ACD_sHsps-like 30 109 - -
Pvu5g0122 377 MobiDBLite consensus disorder prediction 151 233 - -
Pvu5g0122 377 Pfam Hsp20/alpha crystallin family 31 115 IPR002068 -
Pvu5g0122 377 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 20 128 IPR002068 -
Pvu5g0122 377 Gene3D - 9 113 IPR008978 -
Pvu5g0122 377 MobiDBLite consensus disorder prediction 285 310 - -
Pvu5g0122 377 MobiDBLite consensus disorder prediction 196 233 - -
Pvu5g0122 377 MobiDBLite consensus disorder prediction 111 139 - -
Pvu5g0122 377 MobiDBLite consensus disorder prediction 1 18 - -
Pvu5g0122 377 SUPERFAMILY HSP20-like chaperones 20 116 IPR008978 -
Pvu5g0122 377 Coils Coil 220 240 - -
Pvu5g0122 377 MobiDBLite consensus disorder prediction 1 21 - -
Pvu5g0122 377 PANTHER HEAT SHOCK PROTEIN 26 2 376 IPR045045 -
Pvu5g0122 377 MobiDBLite consensus disorder prediction 111 128 - -
Pvu5g0122 377 PANTHER HSP20/ALPHA CRYSTALLIN FAMILY PROTEIN 2 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0122 Pvu-Chr5 973738 975821 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0122 5 973738 975821 Pvu11g1916 11 46120292 46124750 PCT