Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1612 ATGGTATCATTATGTTGCAGCTTAGAATCATGGACTTTTGAAATAATTGTGATCTTGTCTGGTGCTCTTGCTAATCCGAAATTGCAAACTTCAGTTCTTTCTATATGTACAAGGATCTCAAATGAATTAGGGGCTGGTAGTTCAAAAGCTGCATATTTAGCACTTAAAGTCACCATGTTCTTGGCCTTTTTGGTGGGGCTTTCAGAATTTTCTGTCCTTATGTCGTTATGGAAAGTTTGGGGGCGTGCTTTTACCAATGTGCATGAAGTTCTCACACATGTGATTTCCATGATGCCAATTCTTGCAACTTCTGTCTTTATAAATTCATTTCAAACAGCATTTCAAGGTGTTGCCAGAGGATGTGGTTGGCAAAAACTTGGTGCATTTATCAATCTAGGATCCTTTTATTGTTTGGGTGTTCCTCTCTCCATTGTCTCAGCTTTTGTATTCCACCTGAAAGCAAAGGGGCTATATTTAGGGATCGTATTAGCACTCACTGTGCAAGTGGTGTGCTTTCTTCTGGTCACTTTACGTGCCAATTGGGAGAAAGAAGTAAGTTTTCTGGGAAGAAAATCAAGAATGAAAGGAGTTACAAGGCAGAAAGTGATGGAAGAAATGAAGAAACAGTTATGGTTGGCCGGGCCTCTCTTTACAGTTGGTGTGCTGCAGTACAGTATGCAGGTTATATCTGTTATGTTTGTTGGTCATCTTGGAGAAGTGCCTCTTTCTGGTGCTTCTCTTGCCACTTCCTTTGCATCTGTCACTGGTTTCAATTTGTTGATGGGTATGGCTAGTGCATTGGATACCTTGTGTGGCCAATCATTTGGGGCAGGGCAGCACCATATGGTAGGCATACACATGCAGAGAGCTGCCTTTGTTCTCTTATTTGTAAGTGTCTTTCTTGCAATCATGTTGGTATTCACCAAACACATTCTAGTTGCTATGCACCAGCAAGTTGCCATAGCTGAGGAGGCAGGAGTATATGCCCTTTACTTGATTCCAAGCCTCTTTGCTTATGGCATCTTTCAATGCCAACTCAAGTTTCTACAAACTCAAAACATTGTCTTCCCCATGGTGCTGAGCTCTGCTTTGGTGGCTTCACTTCATATCCCTTTATGTTGGTTGTTGGTAACAAAATCAGGATTTGGAAGTAAGGGGGCTGCCATAGAAAATTCAGTATCCTACTGGATCAATGTGCTGCTGATAGGACTTTATGTGAAATTTTCTTCATCATGTGAAAAATCAAGAACTGGCTTCTCAAAGAAGGCCTTGCAAAATATCCCAGAATTCCTTAAAATTTCAATACCTTCAGCTTGTATGCTTTGCTTAAAGGCTTGGACATTTGAAATAATGGTTCTGCTATCTGGCCTTCTTCCAAATCCTCAGTTAGAAACTTCGGTGTTATCGATATGTCTTAACACATTTGTACTTGCCTGGATGATTCCCTTTGGATTAAGCTCTGCAGCATGCACAAGGGTCTCAAATGAACTGGGGGCTGGCAATCCACAAGCTGCAAGTCTTGCAGTTAGAGTTGCTCTCTGCGTGGTCCTTGCTGAGGGTATCATTATGGTATTACTCATGATACTGCTTAGAAAAATATGGGGTAATCTTTATAGCAGTGAAACAGAAGTTGTAGATTATGTAGCAGCCATGATGCCTTTTCTTGCAATCTGCAGCTTCCTTGATGGGATTCAAAGTGTTCTTTCAGGCATTGCAAGAGGTTCTGGTTGGCAGAAGATTGGTGCAATTGTTAATCTTGGATCATTTTATTTTGTGGGAGTTCCTTCTGCAGTGGTGTTAGGATTTGTTTTGCACATGAAAGGGAAGGGTCTTTGGTTGGGGATTGTTTCTGCATTCATGGTGCAAGTGATACTTTTTGGAGTCATCATTACCATCAGAACTAGCTGGGAGAAAGAA 1917 0.4126 MVSLCCSLESWTFEIIVILSGALANPKLQTSVLSICTRISNELGAGSSKAAYLALKVTMFLAFLVGLSEFSVLMSLWKVWGRAFTNVHEVLTHVISMMPILATSVFINSFQTAFQGVARGCGWQKLGAFINLGSFYCLGVPLSIVSAFVFHLKAKGLYLGIVLALTVQVVCFLLVTLRANWEKEVSFLGRKSRMKGVTRQKVMEEMKKQLWLAGPLFTVGVLQYSMQVISVMFVGHLGEVPLSGASLATSFASVTGFNLLMGMASALDTLCGQSFGAGQHHMVGIHMQRAAFVLLFVSVFLAIMLVFTKHILVAMHQQVAIAEEAGVYALYLIPSLFAYGIFQCQLKFLQTQNIVFPMVLSSALVASLHIPLCWLLVTKSGFGSKGAAIENSVSYWINVLLIGLYVKFSSSCEKSRTGFSKKALQNIPEFLKISIPSACMLCLKAWTFEIMVLLSGLLPNPQLETSVLSICLNTFVLAWMIPFGLSSAACTRVSNELGAGNPQAASLAVRVALCVVLAEGIIMVLLMILLRKIWGNLYSSETEVVDYVAAMMPFLAICSFLDGIQSVLSGIARGSGWQKIGAIVNLGSFYFVGVPSAVVLGFVLHMKGKGLWLGIVSAFMVQVILFGVIITIRTSWEKE 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1612 639 PANTHER PROTEIN DETOXIFICATION 6 187 - -
Pvu4g1612 639 PANTHER PROTEIN DETOXIFICATION 198 639 - -
Pvu4g1612 639 PANTHER MULTIDRUG RESISTANCE PROTEIN 6 187 - -
Pvu4g1612 639 PANTHER MULTIDRUG RESISTANCE PROTEIN 198 639 - -
Pvu4g1612 639 CDD MATE_eukaryotic 205 639 IPR045069 GO:0042910|GO:1990961
Pvu4g1612 639 TIGRFAM matE: MATE efflux family protein 215 612 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu4g1612 639 Pfam MatE 436 598 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu4g1612 639 Pfam MatE 36 144 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu4g1612 639 Pfam MatE 215 375 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1612 Pvu-Chr4 43378013 43384543 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0352 7 2771864 2774445 Pvu4g1612 4 43378013 43384543 ECH
Pvu4g1612 4 43378013 43384543 Pvu4g1612 4 43378013 43384543 ECH
Pvu2g3362 2 48502924 48505936 Pvu4g1612 4 43378013 43384543 PCT