Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1610 ATGGGGTTATGGAGTAAGGAGATAAGAGAAGAAGCAAAGAAGCAAGTATGGCTAGCAGGGCCTATGATATTTGTCTGTGTCTTTCAGTTTAGTCTGCAAATGATATCTCTCATGTTTGTAGGCCATTTGAGTGAGTTGCTTCTGGCTTCTGTGTCTTTGTCTACTTCAATTGTCAATGCTACTGGTTTCAATGTCATGATGGGGCTGTCAAGTGCATTGGACACATTTTGTGGTCAATCATATGGAGCAAAGCAGTATCACATGCTTGGTGTGCACACCCAAGGAGCCATGGTGGTTCTCACCATTGTCAGTATACCAGTGTCCATTATCTGGGTATACTTGGAACCTATTCTTGTTCTTCTTCATCAGAACAAAGAAGTTGCAGCACTAGCTCAACTCTATGCCAGATATTTGATCCCAAGTCTTTCAGCCAATGGTCTTCTTCGCTGCATTACTAAGTTCCTACAAACTCAAAGCATAGTCTTTCCTATGGTGCTAGCCACTGGCCTTACTAGCTTACTGCACTTGATTCTCTGTTGGGTTCTCATTATAAAATTTGAGTTTGGTATCAAAGGATCTGCCATTGCAATTTGCATTTCAAATTGGTTTAATACCATAATCCTTGCACTTTACATACGATTCTCCCCTTCATGCAAAGAAACTTGGACTGGTTTATCTAAGGAATCATTGCGTAACATTCCAAATTTTCTCAGACTTGCTTTCCCTTCAGCAGTCATGGTCTGCTTAGAATCATGGACTTTTGAAATAATTGTGATCTTGTCTGGTGCTCATGCTAATCCGAAATTGCAAACTTCAGTTCTTTCTATATGTCTTAACACGTGTGGAATATTTTGGATGGTACCATTTGGACTTAGTGCTGCTGGAAGTACAAGGATCTCAAATGAATTGGGGGCTGGTAGTCCAAAAGCTGCATATTTAGCAGTTAAAGTCACCATGTTCATGGCCTTTTTGGTGGGGATTTTAGAATTTTCTGTCCTCATGTCGTTATGGAAAGTTTGGGGGCGTGCTTTTACCAATGTGCATGAAGTGCTCATACATGTGGCTTCCATGATGCCAATTGTTGCAACTTCTGCCTTTATAGATTCAATTCAAACAGCATTTCAAGGTGTTGCCAGAGGATGTGGTTGGCAGAAACTTGGTGCATTTATCAATCTAGGATCTTATTATATTTTGGGTGTTCCTTTCTCCGTTGTCTCAGCTTTTGTATTCCACCTGAAAGAACAGGGGCTATATTTAGGGATCGTATTAGCACTCACTGTGCAAGTGGTGTGCTTTCTTCTGGTCACTTTACGTGCCAATTGGGAGAAAGAAGCAAAAAAGGCAGCTGCAAGAGTAGGAGGCAGTGAAGTTCAAGCTGAGGAGGCTCAGGGTGGCCAAAATGTTCATACTGATTCATAG 1419 0.4137 MGLWSKEIREEAKKQVWLAGPMIFVCVFQFSLQMISLMFVGHLSELLLASVSLSTSIVNATGFNVMMGLSSALDTFCGQSYGAKQYHMLGVHTQGAMVVLTIVSIPVSIIWVYLEPILVLLHQNKEVAALAQLYARYLIPSLSANGLLRCITKFLQTQSIVFPMVLATGLTSLLHLILCWVLIIKFEFGIKGSAIAICISNWFNTIILALYIRFSPSCKETWTGLSKESLRNIPNFLRLAFPSAVMVCLESWTFEIIVILSGAHANPKLQTSVLSICLNTCGIFWMVPFGLSAAGSTRISNELGAGSPKAAYLAVKVTMFMAFLVGILEFSVLMSLWKVWGRAFTNVHEVLIHVASMMPIVATSAFIDSIQTAFQGVARGCGWQKLGAFINLGSYYILGVPFSVVSAFVFHLKEQGLYLGIVLALTVQVVCFLLVTLRANWEKEAKKAAARVGGSEVQAEEAQGGQNVHTDS* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1610 472 PANTHER MULTIDRUG RESISTANCE PROTEIN 3 452 - -
Pvu4g1610 472 CDD MATE_eukaryotic 11 447 IPR045069 GO:0042910|GO:1990961
Pvu4g1610 472 TIGRFAM matE: MATE efflux family protein 21 417 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu4g1610 472 Pfam MatE 21 181 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu4g1610 472 Pfam MatE 242 404 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu4g1610 472 MobiDBLite consensus disorder prediction 452 472 - -
Pvu4g1610 472 PANTHER PROTEIN DETOXIFICATION 3 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1610 Pvu-Chr4 43356493 43361292 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0354 7 2782867 2786710 Pvu4g1610 4 43356493 43361292 ECH
Pvu7g0353 7 2777627 2780568 Pvu4g1610 4 43356493 43361292 ECH
Pvu4g1610 4 43356493 43361292 Pvu4g1610 4 43356493 43361292 ECH
Pvu4g1610 4 43356493 43361292 Pvu2g3362 2 48502924 48505936 PCT