Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0704 ATGTACACTTCGAGGAAGAAAATTCTCAAGGATAAGGATGCAGAGCCCACTGAACTTGAGGAGACAGTTGCACAGTACTTATTTGACTTGGAGAATACCAACCAGGAGCTGAAAAGTGACTTGAAAGATCTCTATATAAATCAAGCAATTCAAATGGATGTGGCGAATAATCGCAAGGCTGTAGTCATCTATGTGCCTTTCAGATTGAGCAAAGCATTCCACAAGATTCATCTCCGACTTGTCAGAGAGTTGGAGAAGAAATTTAGCGGGAAGGATGTTATTTTGATTGCCACAAGGAGGATCTTGCGGCCACCAAAGAAGGGCTCTGCCGTTCAGCGTCCCCGGACCCGGACATTGACTTCTGTCCATGATGCCATGCTAGAGGATGTTGTGTATCCTGCAGAGATTGTTGGCAAAAGGACCAGATATAGAATTGATGGGTCAAAAATTATGAAGGTTTTCTTGGATCCCAAGGAGCGCAATAACACTGAGTACAAGCTGGAGACTTTTTCTGGAGTTTACAGGAAGCTTACTGGAAAAGATGTAGTATTTGATTATCCAGTCACAGAAGCCTGA 576 0.434 MYTSRKKILKDKDAEPTELEETVAQYLFDLENTNQELKSDLKDLYINQAIQMDVANNRKAVVIYVPFRLSKAFHKIHLRLVRELEKKFSGKDVILIATRRILRPPKKGSAVQRPRTRTLTSVHDAMLEDVVYPAEIVGKRTRYRIDGSKIMKVFLDPKERNNTEYKLETFSGVYRKLTGKDVVFDYPVTEA* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0704 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Pvu4g0704 191 Coils Coil 27 47 - -
Pvu4g0704 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 IPR000554 GO:0003735|GO:0005840|GO:0006412
Pvu4g0704 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 - -
Pvu4g0704 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0704 Pvu-Chr4 9282802 9285028 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0704 1 188 Cytoplasmic Ribosomal Protein Gene Family AT5G16130 81.915 2.48e-115 324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g0704 4 9282802 9285028 Pvu2g3362 2 48502924 48505936 ECH
Pvu4g0704 4 9282802 9285028 Pvu4g0704 4 9282802 9285028 ECH