Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g3005 ATGATGGGTCTGGTCACGAATCTTCGACGTTCAAGAACAGAGGGTGCCCAACAAGAGAGCATGCCCGTTTTGGCTCCGGGTGGCAACCCAAAGAGGAAATGGAGCAATCTAATGCCTCTTGTTGTGGCCTTTGTGGTCATTGCGGAGATCGCGTTTCTGGGTAGGTTGGATATGGCAAAAAACGCTGCCATGGTTGACACCCTCGCTGACTTGTTCTACCGCTCTCGTGCGGTCGTTGAAGGTGACGATTTGGGGATGGGTGGGTTGGTGGCTCCTGATCGGAATTCTGAATCGGATAGTTGTGAGGAATGGTTGGAGAGGGAGGATGCTGTCACGTATTCGAGGGACTTTTCCAAAGACCCTGTTTTTGTTTCTAGAGCTGTCCAGGAGTGGAAGACGTGTTCAATTGGATGTAAATTTGGGTTTAGTGGGGATAAGAAGCCAGATGCTGCATTTGGGTTACCTCAACCAAGTGGAACAGCTAGCGTTCTGCGATCAATGGAATCGGCAAAATACTATGCTGAGAACAATATTGCCATGGCAAGACGGAGGGGATATAACATTATAATGACAACCAGTCTATCATCGGATGTTCCTGTTGGATATTTTTCATGGGCTGAGTATGATATGATGGCACCAGTGCAGCCAAAAACTGAAGCTGCTCTTGCAGCTGCATTCATTTCCAATTGTGGTGCTCGAAATTTCCGGTTGCAAGCTCTTGAGGCCCTTGAAAAATTAAACATCAAGATTGATTCTTATGGTGGTTGTCATAGGAACCGTGATGGAAGAGTGAGCAAAGTGGAAGCCCTGAAGCACTACAAGTTTAGCTTAGCATTTGAGAATTCTAATGAGGAAGATTATGTAACTGAAAAATTCTTCCAATCCCTTGTTGCTGGAACTGTCCCTGTGGTTGTTGGTGCTCCAAACATTCAGGACTTTGCTCCTTCTCCTGGTTCAATTTTACATATTAAAGAAATAGAGGATGTTGAGTCTGTTGCAAAGACCATGAGATACCTATCAGAAAATCCAGAAGCATATAATCAATCATTGAGGTGGAAGTATGAGGGTCCATCTGATTCCTTCAAGGCCCTTGTGGATATGGCGGCTGTACATTCGTCGTGCCGCCTTTGCATTCACTTGGCCACAGTGAGTAGAGAGAAGGAAGAAAAGAGTCCAAGCTTTAAGAGACGTCCTTGCAAGTGCACTAGAGGGCTACAAACTGTATACCATATCTATGTGAGAGAAAGGGGAAGGTTTGAAATGGAGTCCATTTACCTAAGGTCTGGCAATTTAACTCTGGATTCTGTGAAGGCTGCTGTTGTTTTGAAGTTCACATCCAAGAATCATGTACCTGTATGGAAGACTGAAAGGCCTGAAGTTATAAGAGGGGGTACTGATTTGAAACTCTACAAAATATACCCAATTGGCTTGACACAGAGACAAGCTCTTTATACCTTCAGCTTCAAAGGTGATGCTGATTTCAGGAGTCACTTGGAGAACAATCCTTGTGCCAAGTTTGAAGTCATTTTTGTGTAG 1536 0.4466 MMGLVTNLRRSRTEGAQQESMPVLAPGGNPKRKWSNLMPLVVAFVVIAEIAFLGRLDMAKNAAMVDTLADLFYRSRAVVEGDDLGMGGLVAPDRNSESDSCEEWLEREDAVTYSRDFSKDPVFVSRAVQEWKTCSIGCKFGFSGDKKPDAAFGLPQPSGTASVLRSMESAKYYAENNIAMARRRGYNIIMTTSLSSDVPVGYFSWAEYDMMAPVQPKTEAALAAAFISNCGARNFRLQALEALEKLNIKIDSYGGCHRNRDGRVSKVEALKHYKFSLAFENSNEEDYVTEKFFQSLVAGTVPVVVGAPNIQDFAPSPGSILHIKEIEDVESVAKTMRYLSENPEAYNQSLRWKYEGPSDSFKALVDMAAVHSSCRLCIHLATVSREKEEKSPSFKRRPCKCTRGLQTVYHIYVRERGRFEMESIYLRSGNLTLDSVKAAVVLKFTSKNHVPVWKTERPEVIRGGTDLKLYKIYPIGLTQRQALYTFSFKGDADFRSHLENNPCAKFEVIFV* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g3005 511 MobiDBLite consensus disorder prediction 1 27 - -
Pvu3g3005 511 Gene3D - 165 360 IPR038577 -
Pvu3g3005 511 PANTHER FUCOSYLTRANSFERASE-LIKE PROTEIN-RELATED 33 488 - -
Pvu3g3005 511 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 120 385 - -
Pvu3g3005 511 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 33 488 IPR001503 GO:0006486|GO:0008417|GO:0016020
Pvu3g3005 511 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 221 386 IPR001503 GO:0006486|GO:0008417|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g3005 2 511 Xyloglucan Fucosyltransferase1 AT3G19280 65.444 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g3005 K00753 - gmx:100792811 890.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g3005 3 51780902 51785798 Pvu3g3005 3 51780902 51785798 ECH