Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1922 ATGGTGAAGATATGTGGAATTGGAGCTGGGTATGTAGGGGGTCCTACAATGGCTGTGATTGCCCTGAAATGTCCCTCAATTGAAGTGGCTGTGGTTGACATCTCTCACTCTCGCATATCAGCTTGGAATAGCAACAAACTCCCTATTTATGAGCCTGGCCTAGAAGAAGTGGTGAACCAGTGTAGGGGAAAGAACCTCCTCTTCAGCACCGATGTTGAAAAGCACGTTTATGAGGCAGATATAATCTTTGTTTCAGTAAACACCCCAACAAAAGTTAGAGGACTTGGAGCTGGCAAGGCTGCAGACTTGACTTATTGGGAAAGTGCAGCTAGGATGATAGCCGATGTTTCCAAGTCAAATAAGATTGTTATTGAGAAATCCACTGTTCCAGTGAGAACAGCTGAGGCAATTGAGAAAATTCTAACTCACAACACCAATAGCAAGGACATCAAGTACCAAATTCTGTCAAATCCTGAGTTTCTCTCTGAGGGAACAGCCATTCAGGACCTTCTAAACCCTGACCGGGTTCTCATTGGAGGGAACCAAGACCCTGAAGGTATAGAAGCAATCAAAAAATTGAAGGCCATATACGCTCATTGGGTGCCTGAAGACAGAATCATAACAACCAATTTGTGGTCAGCAGAACTATCCAAGTTAGCTGACAATGCCTTCTTGGCCCAAAGGATTTCATCTATCAATGCTATGTCTGCCTTATGTGAGGCCACTGGGGCTGAAGTTTCACAAGTTTCTCTTGCTCTCAGCAAAAACACCAAAATTGGCCCAAAGTTCCTCAATGCCAGTGTTGGTTTTGGTGGCTCTTGCTTTCAAAAGGACATACTCAATTTGGTGTACATATGTGAGAGCAATGGCCTCAGTGAAGTGGCAAATTACTGGAAAGAAGTGATCAAGGTGAATGACTACCAAAAGAGTAGGTTTGTGCACAGGGTTGTGACCTCAATGTTCAACACAGTTTCAGGTAAGAAGATTGCAATTCTGGGGTTTGCCTTCAAGAAGGACACTAGTGACACAAGAAAAACTCCTGCAATTGATGTTTGCAAAGGCCTTTTGGGAGATAACGCGTTCTTGAGTATCTATGATCCACGCGTTACTGAGATGCAGATTCAAAAGGATTTGTCAATGGATGGTGTTGAATGGGACCATCCAATCCACCTGCAGCCAAAGAGTTCTAGTGTTGTGAAACAGGTTAATGTTGTTGGAGATGCTTATGAGGCAACTAGAGATGCTCATGGACTATGCATTCTTACAGAGTGGGAAGAGTTCAAGACAATTGACTATCAAAGAGTGTACGACAACATGGAGAAACCAGCATTTGTGTTCGATGGTAGAAACATGTTGAATGTTGACAAGTTGAGGGAAATTGGATTCATTGTTTACTCAATTGGGAGGCCTTTAGACCAATGGCTGAAGAACATGAAGATCGTGAATTGA 1449 0.4313 MVKICGIGAGYVGGPTMAVIALKCPSIEVAVVDISHSRISAWNSNKLPIYEPGLEEVVNQCRGKNLLFSTDVEKHVYEADIIFVSVNTPTKVRGLGAGKAADLTYWESAARMIADVSKSNKIVIEKSTVPVRTAEAIEKILTHNTNSKDIKYQILSNPEFLSEGTAIQDLLNPDRVLIGGNQDPEGIEAIKKLKAIYAHWVPEDRIITTNLWSAELSKLADNAFLAQRISSINAMSALCEATGAEVSQVSLALSKNTKIGPKFLNASVGFGGSCFQKDILNLVYICESNGLSEVANYWKEVIKVNDYQKSRFVHRVVTSMFNTVSGKKIAILGFAFKKDTSDTRKTPAIDVCKGLLGDNAFLSIYDPRVTEMQIQKDLSMDGVEWDHPIHLQPKSSSVVKQVNVVGDAYEATRDAHGLCILTEWEEFKTIDYQRVYDNMEKPAFVFDGRNMLNVDKLREIGFIVYSIGRPLDQWLKNMKIVN* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1922 482 SMART UDPG_MGDP_dh_C_a_2_a 330 454 IPR014027 GO:0016616|GO:0051287
Pvu3g1922 482 Gene3D - 211 242 - -
Pvu3g1922 482 PANTHER UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE 1 481 IPR028356 GO:0003979
Pvu3g1922 482 PIRSF UDPglc_DH_euk 1 481 IPR028356 GO:0003979
Pvu3g1922 482 Pfam UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 188 IPR001732 GO:0016616|GO:0051287
Pvu3g1922 482 Gene3D - 243 481 - -
Pvu3g1922 482 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 212 311 IPR008927 -
Pvu3g1922 482 PIRSF UDPglc_GDPman_dh 2 469 IPR017476 GO:0016616
Pvu3g1922 482 TIGRFAM NDP-sugDHase: nucleotide sugar dehydrogenase 3 450 IPR017476 GO:0016616
Pvu3g1922 482 Pfam UDP-glucose/GDP-mannose dehydrogenase family, central domain 212 306 IPR014026 GO:0016616|GO:0051287
Pvu3g1922 482 Gene3D - 1 210 - -
Pvu3g1922 482 Pfam UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 330 453 IPR014027 GO:0016616|GO:0051287
Pvu3g1922 482 PANTHER UDP-GLUCOSE 6-DEHYDROGENASE 3 1 481 - -
Pvu3g1922 482 SUPERFAMILY UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 317 465 IPR036220 -
Pvu3g1922 482 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 216 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1922 Pvu-Chr3 39802814 39805224 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0356 8 2917490 2920530 Pvu3g1922 3 39802814 39805224 ECH
Pvu3g1922 3 39802814 39805224 Pvu3g1922 3 39802814 39805224 ECH