Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1317 ATGGACACCCCCGATAAGAAAAGATCTGATTTTGTTGATGTAGTTAGGTCTTGGATCCCTCGAAGGACCGAGCCACCAAATGTGTCGAGGGACTTCTGGATGCCCGATCAGAGTTGTAGGGTCTGCTATGAGTGTGATTCGCAGTTCACGATATTCAACCGCAGACATCACTGTCGAATCTGTGGGCGAGTTTTCTGTGCAAAATGCACTGCCAATTCTGTTCCCGCGCCTTCAGATGAGCCAAATACTGTCCGTGAAGAGTGGGAGAGGATAAGGGTCTGCAACTATTGTTTTAAACAATGGGAAGGGTTAGCAACAATTGATAATAATGGAAGAGCAGATCCTTCGTCCACCCCTTGTCTTAGTCCTTCACCGTCTACAACAAGCTTGGTCAGCACTAAGTCCAGTTGTACCTGTCATAGTAGCAGCAGCACTGCTGGTTCAGTTCCTTATACAACTGGGCCTTATCAGCGTGTGCCTTATAGTCCCCGGCAATCTTCGCAAATGAATCAGATAGCTGATGAACAAGATAATTTAAATTCTGGTAGGAGTTCAAATCCCTCCGAGGCTGTAGGGAATTTGACTTCTAACCAATTTGGCTATTGCTTCAACAGGAGTGATGATGAGGATGATGATTATGGTGTTTATCATTCGGATACAGAATCAAGACATTATTCTCATGTACATGACTTTGAAGATCCAGTTAACATTCATGGGGTTGAACATGTCTACGGGCCACATCAAATGCATCCTGACGAAGCTAGCATTCATGAAAAAAGCTTGAGTTGCCTAACGCCACCACAGAATCTTGATCTAGAAGGTGTAGATGGAATTCAAGCACCTGGTAAAGAAGCTGATGAGCATGATCATGCTGATGGATGTGAAACTTCTCCTTATCATGAAGAGAGCAATAATACAGATCCTGTGGATTTTGAGAGTAATGGACTACTATGGCTACCTCCTGAGCCAGAAGATGAAGAGGATGATAGAGAAGCTGTTCTTTTCGATGATGATGAGGATGAAGGTACTACTGGAGGTGGGGAATGGGGATATCTACGATCCTCCACTAGTTTTGGCTCTGGAGAATGTCGTAGCAGAGATAAAACAAGTGAGGATCATAGGAAGGCCATGAAGACTGTAGTGGAAGGGCATTTTAGAGCTCTGGTCACTCAGCTCTTACAAGTGGAAAACCTAACTATTTGTGATGAAGATGGAAAAGAGAGTTGGTTGGATATAATTACCGCTTTGTCTTGGGAAGCTGCTACAATTCTGAAGCCCGATATGAGCAGAGGTGGAGGTATGGATCCTGGTGGATATGTAAAGGTTAAATGCATAGCTTGTGGACATCGGAATGAAAGCATGGTGGTTAAAGGAGTTGTATGTAAAAAGAATGTGGCTCATCGGAGAATGACATCAAAAATTGATAAACCACGTTTTCTAATACTTGGAGGTGCTTTGGAGTATCAGCGTGTTTCTAACCAGTTATCAAGTGTTGATACTTTGTTACAGCAGGAGATGGACCATTTGAAGATGGCAGTTGCAAGGATTGATGCTCATCACCCCAATGTGCTTTTGGTGGAGAAGTCAGTATCTCGTTATGCTCAAGATTACCTTCTAGCTAAAGACATATCACTTGTTTTGAATATCAAAAAGCCACTTTTAGAGCGCATTGCCCGTTGCACCGGTGCACAAATTGTCCCTTCAATTGATCATCTGACCTCTCAAAAATTGGGATATTGTGAAACATTCCATGTTGACAAATTTTTTGAGGAGCATGGTAGTGCAGGGCAAGGTGGGAAAAAATCAACAAAGACTTTGATGTTCTTTGAGGGTTGTCCGAGACCTTTAGGTTGCACTATCTTGCTGAAGGGTGCCAATGGGGACGAGTTGAAGAAGGTGAAACATGTGATCCAATATGGAGTCTTTGCAGCCTATCACCTGGCATTAGAGACATCTTTTCTGGCTGATGAAGGTGCTTCACCACTAGAGTTTCCTTTGAAATCTCCCATAACTGTTGCATTACCAGATAAACCATCTAGTATTGTGAGATCCATTTCCACTATCCCTGGATTTTCTGTTCTCTCTGCTAGAGAGTCTCAGGGAGCAAAACCTTTTGAAATACCAAAATCTGACGACATCCACAAGACAGAAAGAACCCCATCTAGCTGCAGTGAGTCCACTGAAAGATCATTGGTTGGTGACTCAATCAATATGCATGAAGTCCCGGGAGTTGCCATCCAATCAGCTCAGGATATGCCATCTTCCCTCTGCAAAAGTTTCCTTTCGAACACTGCTTCTAAGGAAGATGATTCTTTTGGAACATTTGACTCTTCACAACAAGATGGCAATAGCTACCTCAGAGCTGCAGAATTGTACGCTAATCAAGGCCCTAGCTTTGGGGCACCATATGTAAAACATGATACTAATAATAGTAATAACAATAATGATCATGAGGACATGGTACATTCGAATGAAGATTTTCCTCCCTCAACTTCCGACCATCAGAGTATTTTAGTCTTTTTATCAACACGTTGTGCATGGAAAGGAACTGTTTGTGAAAGGTCTCATCTGGTCAGAATTAAATACTATGGAAGTTCTGATAAGCCTTTGGGACGGTTCTTGAGAGATCAACTACTCGATCAGAGTTACACGTGCTGCTCATGTGAGTCGCCACCAGAAGCCCATGTTCATTGTTATACTCATCGGCAAGGCAGCCTGACAATTTCTGTTAAGAAACTATCGGATTTTGATTTACCAGGGGAACGAGAAGGTAAAATTTGGATGTGGCACAGATGCCTGAAATGTCCTCGTGTAAATGGTTTTCCTCCTGCTACACGGAGAGTAGTTATGTCTGATGCTGCCTGGGGCTTATCCTTTGGGAAATTTTTGGAGCTGAGTTTTTCAAATCATGCAGCAGCAAGCAGGGTTGCAAGTTGTGGTCATTCGCTTCACAGAGATTGTTTAAGATTCTATGGTTTTGGGAAGATGGTTGCCTGCTTTCGTTATGCTTCAATTCACCTTCATTCTGTTTATCTTCCCCCACCTAAACTTGAATTCTTCAACTATGATAGGCAGGACTGGCTACTAAAAGAAGCGTATGAGCTGCATGACAAGGCTGAATTACTGTTTGGTGAAGTGTGCACCGTTCTGCATCAAAATTCAGAGAAGGTTTCAGGTCTTGTGTTACAGGAGGGTGGACAAAGGGTGTCAGATTTTAGGAATCTAATTGTGGAACTTAAAGAGATGCTGCAGTATGAGAAAGAAGAATTTGAGGACTCATTACGAAAAATGCTGCATAGAGAAGCCAAAGCTGAACAACCTGTGATTGATATTCTGGAGCTCAATAAGTTGCGCAGGCATATCCTTATCCATTCTTATGTTTGGGACCAGCGCTTGATATATGCATTCAATCTATGTAAAATTATTCTTCAAGAAAATTCAAGGATCTTAAATCATAGAGAAAAGTTGCTTGGTCCTAGAGAAAAACTTGTTGAAGCAGATATTGCCACTAGGCCAGCAAGAGGCTATAGCAGTTCCGATTCCTTTCTTTTGGAAACAAAACCTGATGGAAACTTAAATTTAGAAAACACTAGTCACCTTAGCCACCCTGATGAAGTGATTAAATGTGAGGACAAGGTTAAAGATACAAATCATGATAAGGTTGACCTTTCTCTCTCTGGTTGTGCAAATATCAATGATAGATCTGATTCTGTAGAATTCGGGGGGTCTGTAAGGAGGGCTTTGTCTGAGGGGGAATCTTCTGTTGTGGTCAACTTATCTGATACCCTTGATGCAGCATGGACAGGTGAAAGTCACCCTACAATTTCATCACTCAAAGAAAATGGTTGTCAATCTCCTGATATGTCTGTTCATTCACCTGTGGCAAATACAGTTTCGTCAAAATCAAATTCTGCTAACTATAATGCTGATATAGGTGGGATTGAGGCGGGATGCACTAATTACTCTAAAATACTTTCCAAAGGACTTGATGCTAAATGGAAAGCAGTGCCTTTTGCAAACTTCTTTGGTTCATTCAACAAAACTTCTTCCTTCAATATACAGAAGCTTGTTGAGTATAACCCAGTCCATATTTTATCATTTCGAGAGGTGGAGCGCCAGACTGGTGCCAGACTGCTTCTGCCCGCCGGAACTAGTGATACCATAGTGCCCGTTTACGATGATGAACCCACCAGTGTTATAGCATATGTGCTTGTGTCAGTGGATTATCATATGCAGATGTCAGAATTTGATAGACCTAAAGACAGTGGAGACAGTTCAATTTCATTGCCGCTCTTTGATTCAAGTATACTTTCTCTTAATTCTTTTGATGAGACAATTACTAATACGTACAGAAGTCTTGGCTCTTTTGATGAGAGCATGTTATCCACTTCTGGGTCTCGGAGTTTACCGGCTGGGGATCCACCCTCATACACAAAGGATTTTCATGCAAGGGTTTCTTTTACTGATGATAGCTCCCTTGGGAAAGTGAAATATACTGTAACTTGCTACTACGCAAAGAGATTTGAGGCTTTAAGAAGGACTTGTTGCCCTTCTGAGTTAGATTTTGTGCGGTCCCTTAGCCGTTGTAAGAAGTGGGGAGCTCAGGGAGGAAAGAGCAATGTTTTCTTTGCAAAAACCCTGGATGATAGGTTTATTATCAAGCAGGTTACAAAAACAGAGCTTGAGTCATTTACCAAGTTTGCACCAGCATATTTTAAGTATTTATCTGAGTCAATCAGTACAGGAAGCCCAACTTGTCTTGCGAAGATCTTAGGAATTTATCAGGTAACATCGAAGCACCTCAAAGGAGGGAGGGAAACAAAAATGGATGTTTTGGTTATGGAAAATCTTCTTTACAGACGAAACATTAGGCGGCTTTATGACCTCAAAGGTTCTTCCCGATCACGGTACAATCCGGATACAAGTGGGAGCAATAAAGTGCTGCTGGATCAGAATCTCATTGAAGCTATGCCAACCTCTCCAATATTTGTTGGGAACAAGGCAAAACGGTTGCTAGAGAGGGCTGTGTGGAATGATACTGCCTTCCTTGCATCAATATATGTTATGGACTACTCATTGCTGGTTGGCGTGGATGAGGAAAAACATGAGCTGGTATTAGGTATAATTGATTTCATGAGGCAGTATACATGGGATAAACACCTTGAAACATGGGTGAAGACCTCAGGCATCCTTGGTGGAGACAAGAATACTTCTCCAACTGTTATATCACCGCAGCAGTACAAGAAACGGTTTAGGAAAGCCATGAGTTTATATTTTCTCATGGTGCCAGATCAATGGTCTCCTCCAGAGTTACACCCCAGTGGGTCCCAATCTGACATTTATGACGATAATGCATAG 5358 0.4211 MDTPDKKRSDFVDVVRSWIPRRTEPPNVSRDFWMPDQSCRVCYECDSQFTIFNRRHHCRICGRVFCAKCTANSVPAPSDEPNTVREEWERIRVCNYCFKQWEGLATIDNNGRADPSSTPCLSPSPSTTSLVSTKSSCTCHSSSSTAGSVPYTTGPYQRVPYSPRQSSQMNQIADEQDNLNSGRSSNPSEAVGNLTSNQFGYCFNRSDDEDDDYGVYHSDTESRHYSHVHDFEDPVNIHGVEHVYGPHQMHPDEASIHEKSLSCLTPPQNLDLEGVDGIQAPGKEADEHDHADGCETSPYHEESNNTDPVDFESNGLLWLPPEPEDEEDDREAVLFDDDEDEGTTGGGEWGYLRSSTSFGSGECRSRDKTSEDHRKAMKTVVEGHFRALVTQLLQVENLTICDEDGKESWLDIITALSWEAATILKPDMSRGGGMDPGGYVKVKCIACGHRNESMVVKGVVCKKNVAHRRMTSKIDKPRFLILGGALEYQRVSNQLSSVDTLLQQEMDHLKMAVARIDAHHPNVLLVEKSVSRYAQDYLLAKDISLVLNIKKPLLERIARCTGAQIVPSIDHLTSQKLGYCETFHVDKFFEEHGSAGQGGKKSTKTLMFFEGCPRPLGCTILLKGANGDELKKVKHVIQYGVFAAYHLALETSFLADEGASPLEFPLKSPITVALPDKPSSIVRSISTIPGFSVLSARESQGAKPFEIPKSDDIHKTERTPSSCSESTERSLVGDSINMHEVPGVAIQSAQDMPSSLCKSFLSNTASKEDDSFGTFDSSQQDGNSYLRAAELYANQGPSFGAPYVKHDTNNSNNNNDHEDMVHSNEDFPPSTSDHQSILVFLSTRCAWKGTVCERSHLVRIKYYGSSDKPLGRFLRDQLLDQSYTCCSCESPPEAHVHCYTHRQGSLTISVKKLSDFDLPGEREGKIWMWHRCLKCPRVNGFPPATRRVVMSDAAWGLSFGKFLELSFSNHAAASRVASCGHSLHRDCLRFYGFGKMVACFRYASIHLHSVYLPPPKLEFFNYDRQDWLLKEAYELHDKAELLFGEVCTVLHQNSEKVSGLVLQEGGQRVSDFRNLIVELKEMLQYEKEEFEDSLRKMLHREAKAEQPVIDILELNKLRRHILIHSYVWDQRLIYAFNLCKIILQENSRILNHREKLLGPREKLVEADIATRPARGYSSSDSFLLETKPDGNLNLENTSHLSHPDEVIKCEDKVKDTNHDKVDLSLSGCANINDRSDSVEFGGSVRRALSEGESSVVVNLSDTLDAAWTGESHPTISSLKENGCQSPDMSVHSPVANTVSSKSNSANYNADIGGIEAGCTNYSKILSKGLDAKWKAVPFANFFGSFNKTSSFNIQKLVEYNPVHILSFREVERQTGARLLLPAGTSDTIVPVYDDEPTSVIAYVLVSVDYHMQMSEFDRPKDSGDSSISLPLFDSSILSLNSFDETITNTYRSLGSFDESMLSTSGSRSLPAGDPPSYTKDFHARVSFTDDSSLGKVKYTVTCYYAKRFEALRRTCCPSELDFVRSLSRCKKWGAQGGKSNVFFAKTLDDRFIIKQVTKTELESFTKFAPAYFKYLSESISTGSPTCLAKILGIYQVTSKHLKGGRETKMDVLVMENLLYRRNIRRLYDLKGSSRSRYNPDTSGSNKVLLDQNLIEAMPTSPIFVGNKAKRLLERAVWNDTAFLASIYVMDYSLLVGVDEEKHELVLGIIDFMRQYTWDKHLETWVKTSGILGGDKNTSPTVISPQQYKKRFRKAMSLYFLMVPDQWSPPELHPSGSQSDIYDDNA* 1786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1317 1785 PANTHER 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1B 1 1779 - -
Pvu3g1317 1785 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1462 1616 IPR027484 -
Pvu3g1317 1785 MobiDBLite consensus disorder prediction 281 371 - -
Pvu3g1317 1785 MobiDBLite consensus disorder prediction 281 297 - -
Pvu3g1317 1785 Gene3D - 1618 1760 - -
Pvu3g1317 1785 MobiDBLite consensus disorder prediction 704 729 - -
Pvu3g1317 1785 MobiDBLite consensus disorder prediction 138 191 - -
Pvu3g1317 1785 SUPERFAMILY SAICAR synthase-like 1494 1759 - -
Pvu3g1317 1785 CDD Fab1_TCP 386 658 - -
Pvu3g1317 1785 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1434 1759 IPR002498 GO:0016307|GO:0046488
Pvu3g1317 1785 SUPERFAMILY GroEL apical domain-like 452 624 IPR027409 -
Pvu3g1317 1785 CDD PIPKc_PIKfyve 1496 1759 IPR044769 GO:0000285
Pvu3g1317 1785 MobiDBLite consensus disorder prediction 349 363 - -
Pvu3g1317 1785 MobiDBLite consensus disorder prediction 138 152 - -
Pvu3g1317 1785 SMART fyve_4 28 103 IPR000306 GO:0046872
Pvu3g1317 1785 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 36 102 IPR017455 -
Pvu3g1317 1785 SMART PIPK_2 1469 1760 IPR002498 GO:0016307|GO:0046488
Pvu3g1317 1785 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1702 1756 IPR002498 GO:0016307|GO:0046488
Pvu3g1317 1785 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1535 1701 IPR002498 GO:0016307|GO:0046488
Pvu3g1317 1785 Pfam FYVE zinc finger 33 101 IPR000306 GO:0046872
Pvu3g1317 1785 MobiDBLite consensus disorder prediction 321 344 - -
Pvu3g1317 1785 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 25 106 IPR013083 -
Pvu3g1317 1785 SUPERFAMILY FYVE/PHD zinc finger 31 104 IPR011011 -
Pvu3g1317 1785 MobiDBLite consensus disorder prediction 158 191 - -
Pvu3g1317 1785 Pfam TCP-1/cpn60 chaperonin family 405 652 IPR002423 GO:0005524
Pvu3g1317 1785 Gene3D GroEL 451 624 IPR027409 -
Pvu3g1317 1785 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 1 1779 - -
Pvu3g1317 1785 MobiDBLite consensus disorder prediction 704 722 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1317 Pvu-Chr3 30904587 30915603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1317 2 1779 EF-hand Containing Proteins AT3G14270 57.119 0.0 1911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1317 3 30904587 30915603 Pvu3g1317 3 30904587 30915603 ECH
Pvu3g1317 3 30904587 30915603 Pvu2g0957 2 16623066 16630933 PCT