Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0431 ATGCCTTCAGTGCATCGGGGAAACTTCCCCAATCACCAAACGCAGTTCTCCGCTCGGAGGCAGAAGATAATGCAACAGAGGAAGTCCCTTCCGATTGCTTCAGTTGAGAAAAGACTGGTTGAAGAGGTCCGGAAGAACGATGTGTTGATTATTGTTGGTGAAACTGGAAGTGGAAAAACTACTCAGATTCCTCAGTTTCTGTTTGATGCTGGATTTTGCCGCGATGGAAGGGTTGGGATAACACAACCTAGACGCGTAGCTGCTGTCACTGTGGCCAAACGAGTTGCTGAGGAGTGTGGTGTTGAGTTGGGTCAGAAGGTCGGGTATGCTGTTAGATTTGATGACACGACTTCCGGCTCAACAAGGATTAAGTACATGACCGACGGTTTGCTTTTGAGGGAAGCATTGCTAGATCCATATCTTTCTAAGTATTCTGTTATAATTGTTGATGAGGCTCATGAGAGGACTGTTCACACTGATGTCTTAATGGGTTTGCTAAAGAATGTACAGCTTGTGCGGTCAAGTTCTGTTAGTGATGGTCAGGGCCTTATTTTTGGAAAAAGGAATTTGAAGAAAGTCATGATGTCGGAGAAAGAAAATGACCAGAGTAGCCATTTGCATAAAAAGCCCCGCCATGAGAAGTATGCCCCACTGAAGTTAATCATCATGTCCGCCAGTCTTGATGCACAGGCTTTCTCTGAATACTTTGGTGGTGCCAAAGCTGTTCACATCCAAGGGAGACAGTTTCCTGTAGATATATTTTATACTCGCATAGCAGAGACAGATTATTTAGATGCTTCCTTGATAACAATATTCCAGATTCATTTAGAGGAAGGTCCTGGTGATATACTAGTATTTCTGACTGGGCAAGAAGAGATTGAATCTGTTGAAAGGCTTATCAATGAGAAACTCCCACAATTACCTAAAGAAAATCAGAAGCTTTTAATTGTGCCTATATTTGCCGCTCTTCCATCTGAGCAGCAAATGCGGGTCTTTGCACCAGCTCCATCTGGATTTCGCAAGGTGATATTGGCAACTAATATTGCTGAGACGTCAGTAACAATTCCTGGAATCAAGTATGTAATTGATCCTGGATTTGTTAAAGCCCGCTCCTATGACCCTGGAAAAGGCATGGAGTCCTTGATTATAGTGCCTACATCCAAGTCCCAAGCTCTGCAAAGAAGTGGGCGTGCAGGGCGTGAAGGACCTGGAAAATGCTTTCGTCTATATCCTGAAAAAGAATTTGAGAAACTCGAGGACTCAACAATGCCGGAGATTAAGCGGTGCAATCTTTCTAATGTCATTTTGCAGCTTAAGGCCCTGGGTGTTGATGACATACTAGGATTTGATTTTATTGAGAAACCTTCAAGGGCAGCTATTATAAAATCATTGGAGCAGCTATTTTTGTTGGGTGCCCTAACAGATGAGTGTCAACTATCTGATCCTGTAGGACACCAAATGGCTCGACTGCCGTTGGATCCTATTTATTCCAAAGCTCTTATTTTAGCTAGTCAGTTTAACTGCTTGGAGGAGATGTTGATAAGTGTAGCCCTGCTGTCTGTGGAATCCATATTTTATAGTCCTCGTGACAAGTTAGAAGAGGCAAGAACTGCAACTAAATGCTTCTCAAGTCCTGAGGGAGACCACATCACATTGATTAATGTGTATCGAGCATCTAAAGATTTTTTGGAGAAGAGATCAATGGAAATGGGTATAGCAAAGACTGAAAAGGTTTATAGGAAATGGTGCAAAGAAAATTATATTAATAGCCGGTCTCTTAGACATGCTCGTGACATTCACAAGCAGATTAAGGGACATGTTGAACAAATGGGTCTTAATCTTTCTTCATGTGGAGAAGATATGCTTCAATTCCGCAGATGCCTAGCTGCTTCCTTTTTCCTCAATGCAGCTGTAAAACAGCCAGAGGGGACATACAGGGCTTTGGCAAGTGGTCAGGTGGTGCAGATCCACCCTTCTTCCGTATTATTTCGGCAAAAACCAGAGTGTGTGATATTTAACGAATTGGTCCAAACTAATAACAAGTATGTCAGAAATTTAACCAGAGTTGATTACCTATGGTTAACTGAGCTGGCTCCTCAATATTACGCCATGCAGAATTAA 2121 0.4253 MPSVHRGNFPNHQTQFSARRQKIMQQRKSLPIASVEKRLVEEVRKNDVLIIVGETGSGKTTQIPQFLFDAGFCRDGRVGITQPRRVAAVTVAKRVAEECGVELGQKVGYAVRFDDTTSGSTRIKYMTDGLLLREALLDPYLSKYSVIIVDEAHERTVHTDVLMGLLKNVQLVRSSSVSDGQGLIFGKRNLKKVMMSEKENDQSSHLHKKPRHEKYAPLKLIIMSASLDAQAFSEYFGGAKAVHIQGRQFPVDIFYTRIAETDYLDASLITIFQIHLEEGPGDILVFLTGQEEIESVERLINEKLPQLPKENQKLLIVPIFAALPSEQQMRVFAPAPSGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPGKGMESLIIVPTSKSQALQRSGRAGREGPGKCFRLYPEKEFEKLEDSTMPEIKRCNLSNVILQLKALGVDDILGFDFIEKPSRAAIIKSLEQLFLLGALTDECQLSDPVGHQMARLPLDPIYSKALILASQFNCLEEMLISVALLSVESIFYSPRDKLEEARTATKCFSSPEGDHITLINVYRASKDFLEKRSMEMGIAKTEKVYRKWCKENYINSRSLRHARDIHKQIKGHVEQMGLNLSSCGEDMLQFRRCLAASFFLNAAVKQPEGTYRALASGQVVQIHPSSVLFRQKPECVIFNELVQTNNKYVRNLTRVDYLWLTELAPQYYAMQN* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0431 706 PANTHER ATP-DEPENDENT RNA HELICASE 198 703 - -
Pvu3g0431 706 PANTHER ATP-DEPENDENT RNA HELICASE 12 197 - -
Pvu3g0431 706 CDD DEXHc_DHX33 30 244 - -
Pvu3g0431 706 Gene3D - 4 247 IPR027417 -
Pvu3g0431 706 PANTHER BNAA08G19730D PROTEIN 198 703 - -
Pvu3g0431 706 PANTHER BNAA08G19730D PROTEIN 12 197 - -
Pvu3g0431 706 Pfam Helicase conserved C-terminal domain 272 401 IPR001650 -
Pvu3g0431 706 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 40 245 IPR014001 -
Pvu3g0431 706 SMART helicmild6 294 402 IPR001650 -
Pvu3g0431 706 Gene3D - 248 421 IPR027417 -
Pvu3g0431 706 Gene3D - 449 618 - -
Pvu3g0431 706 SMART ha2_5 462 553 IPR007502 GO:0004386
Pvu3g0431 706 CDD SF2_C_RHA 249 410 - -
Pvu3g0431 706 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 625 701 IPR011709 -
Pvu3g0431 706 SMART ultradead3 28 254 IPR014001 -
Pvu3g0431 706 Pfam Helicase associated domain (HA2) 463 584 IPR007502 GO:0004386
Pvu3g0431 706 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 591 IPR027417 -
Pvu3g0431 706 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 145 154 IPR002464 -
Pvu3g0431 706 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 268 442 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0431 Pvu-Chr3 4658088 4672256 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0431 3 4658088 4672256 Pvu3g0431 3 4658088 4672256 ECH