Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0430 ATGGATCAAGAAGATAACAAGATTGATCTTGTGAATCCTACTGAACTGTCTTCTAATCCTCTGGCATCAGGGACAACTGAGACGATGACCACTGAGAATCCTTTGTCATCTGGAAAGGATGATATGCTGGGTACCGAGAATCCTCCATCTTCAGGAAAAGATGATGTGATGGGTAACGAGAATCTTCCAGAAGTGTCTTCTAATGCTATGTCTTTAGCAAAAGATGGTATAGTGGGCACTGTAAATCCTATTGAAGTGTCTCCTAATCCCATGGCTTTGATAAAAGATGATATGATGAGCATTGATAATCCTGTGTCATCTAGAGAAGATTATGAGAAGTGTGCTAAGAATCCTCCTGAATTGGCTTCTAGATCTCCAACATCAGAAAAAGATGGCATGATGGGCACTATGAATCCCAGTGAAGTGTTTTCTAGTCCTCTGTCACCAGGAAAACATGATATGCTGAACACTGAGAATCTTCCTGAAGTGACTTTTGGTCATCCTTCTTCTGGAGAAGTTGATGGAAGGAAGGATATTGATTCCCCTGAAGGTACTAGTAAACCAAATTTGAGTGGCAAGAATGCCCTACGACTTTTGAAGGCAAAATCTAAAATTGTTAAGAAATTCCAAGCTGGTAAACTTCAGGGGAGGAACTATGGTTCTCAAAAGATTCATGGGAAAAGAAGAATTACGAGTTCTAAAAAAGTGGTGGATAATGCTGATGGGAAACAAATTTCAGACTCTAGTGAGCTAAAGGAAACAAATGATGAACCACCTAAGGGTAAGGGTGAGAAGGCTGAAAATAAAATAAAAGAAAGCCAAAATAAGAGCACTGCTGACAAAAGTCCCAAGGAAGAGTCAGACAGTAGCCAACTGAAGGTTACCGATCCCCCTGAAGGATCTAGTAAACCAGAGTTGAGTGACAAGAATACTCCACAGTCATTGAAGGCAAAATATAAAATTGTTAAGAAATCTCATGCTGGTAAATCATTGAAGAATAGTGGTACTCAGCATATTCATGGCAAAAGAAGAATTAGTATTTCCAAAAAAGTGTTGGATAATGCAGATGAGAAACAAATTTCAGACGATAGCCACCTGAAGGAAACTGATAATGAACCACTGAAAGGGAAGAGTCAGGAGGTTGGAAAAAAAGTAAAAGAAAGCCAAAACAAGAGCACCAATGGCAAAAGTCTCAGAGAGAAGACCCAGACTCGTAAGGATAAGACTAAGCAAAATCTAGAGAGTGAAGAGAAACATAGGGACTTACGCATGGGTTCTAGGAGCGTAAAACACAAAGTTAAGAGAGGTGGCATGGAAAGGAATCTATTGAAAGACAAGAAGGGTGAAAAGCTTGGTGGTTTCATCTTTATGTGCAATGCAAAGACAAAACCCGATTGTTTCCGCTATCGTGTCATGGGTGTTTCAGCTGGTAAAAAGGATGATGTTTTACAAATCAAACCTGGACTTAAGCTTTTTCTTTATGATTTTGATCTGAAGCTACTGTATGGCATTTACAAGGCCTCATCTTCTGGTAGCATGAAGCTTGAACCCAAAGCTTTTGGTGGCAAATTTCCTGCTCAGGTGCGGTTCAAAATTGCTGCTGATTGTTTCCCACTACCTGAGAGCATTTTCAAAAAAGCCATCAAGGAGAATTATAATGAAAAACACAAGTTCAGAACAGAACTTACTGTTAGACAAGTGAGGAAGCTCACTCAACTTTTCCAGCCAGTTGGAATTCGTTCAGGTGTGCACCCTGTCCACTCCCAGCCAAAAGTAATAATTCGAGATAGAGAATCTCCCGAGAGTGTTAGGGGATCATGGTCCCAGTTGCAGAGGGAAAACTATAATGTGCAGTCTTTCTATAGGGATCATCAAATTGACCAACGAGAGGAAATTGGTCATGATCTGTATCCAATGGAGAACAATCAATCTTATAGTCTACCAAGATATAGAAGGAATATGGCTACCACATCTCATGTTAATCCTAGATTGGAATCTTATGACAGACACTATGAACCTCATCACCTGGACCATGGCTACCCGAGAAATGTTCCTGCTCATGTAGAAAGTGTTCGAACTGATCATCTTTATTTGAATGACAGTAGGGATTCTCTGTTTTTGAATGACAGTAGGGATTCTCTGTTTTTGAATGACAGCAGGGATCCTTATCATGTCTATCGCCACGGTGTTTCACCTAGGGATGCATATTTGGGACCTTTAAGCAGGGAGGAAAACTCTTATTTGAATAGGCGAAGTCATTTTGTTGGGACGGATAACTTGCCAAGGAGAGAGGCTGAACGAGATAGGCATTACCCAATCTATGATGCTCCTGATGCTTTGTCTGATCGTCATCAACTGCGGCCATATCATGGAGACAGGTTGCCAGTTTCTTCTCGTTACTCTTTTGCTGGCCCTTCATTTCGTCACCACTGA 2433 0.4073 MDQEDNKIDLVNPTELSSNPLASGTTETMTTENPLSSGKDDMLGTENPPSSGKDDVMGNENLPEVSSNAMSLAKDGIVGTVNPIEVSPNPMALIKDDMMSIDNPVSSREDYEKCAKNPPELASRSPTSEKDGMMGTMNPSEVFSSPLSPGKHDMLNTENLPEVTFGHPSSGEVDGRKDIDSPEGTSKPNLSGKNALRLLKAKSKIVKKFQAGKLQGRNYGSQKIHGKRRITSSKKVVDNADGKQISDSSELKETNDEPPKGKGEKAENKIKESQNKSTADKSPKEESDSSQLKVTDPPEGSSKPELSDKNTPQSLKAKYKIVKKSHAGKSLKNSGTQHIHGKRRISISKKVLDNADEKQISDDSHLKETDNEPLKGKSQEVGKKVKESQNKSTNGKSLREKTQTRKDKTKQNLESEEKHRDLRMGSRSVKHKVKRGGMERNLLKDKKGEKLGGFIFMCNAKTKPDCFRYRVMGVSAGKKDDVLQIKPGLKLFLYDFDLKLLYGIYKASSSGSMKLEPKAFGGKFPAQVRFKIAADCFPLPESIFKKAIKENYNEKHKFRTELTVRQVRKLTQLFQPVGIRSGVHPVHSQPKVIIRDRESPESVRGSWSQLQRENYNVQSFYRDHQIDQREEIGHDLYPMENNQSYSLPRYRRNMATTSHVNPRLESYDRHYEPHHLDHGYPRNVPAHVESVRTDHLYLNDSRDSLFLNDSRDSLFLNDSRDPYHVYRHGVSPRDAYLGPLSREENSYLNRRSHFVGTDNLPRREAERDRHYPIYDAPDALSDRHQLRPYHGDRLPVSSRYSFAGPSFRHH* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0430 810 MobiDBLite consensus disorder prediction 346 424 - -
Pvu3g0430 810 Coils Coil 399 419 - -
Pvu3g0430 810 ProSiteProfiles DCD domain profile. 449 576 IPR013989 -
Pvu3g0430 810 PANTHER DCD (DEVELOPMENT AND CELL DEATH) DOMAIN PROTEIN 134 255 - -
Pvu3g0430 810 PANTHER DCD (DEVELOPMENT AND CELL DEATH) DOMAIN PROTEIN 291 352 - -
Pvu3g0430 810 PANTHER DCD (DEVELOPMENT AND CELL DEATH) DOMAIN PROTEIN 353 808 - -
Pvu3g0430 810 SMART dcd 449 576 IPR013989 -
Pvu3g0430 810 MobiDBLite consensus disorder prediction 121 145 - -
Pvu3g0430 810 MobiDBLite consensus disorder prediction 209 434 - -
Pvu3g0430 810 MobiDBLite consensus disorder prediction 103 195 - -
Pvu3g0430 810 MobiDBLite consensus disorder prediction 103 117 - -
Pvu3g0430 810 MobiDBLite consensus disorder prediction 245 292 - -
Pvu3g0430 810 MobiDBLite consensus disorder prediction 1 68 - -
Pvu3g0430 810 MobiDBLite consensus disorder prediction 10 44 - -
Pvu3g0430 810 Pfam Development and cell death domain 452 574 IPR013989 -
Pvu3g0430 810 PANTHER DCD (DEVELOPMENT AND CELL DEATH) DOMAIN PROTEIN-RELATED 134 255 - -
Pvu3g0430 810 PANTHER DCD (DEVELOPMENT AND CELL DEATH) DOMAIN PROTEIN-RELATED 291 352 - -
Pvu3g0430 810 PANTHER DCD (DEVELOPMENT AND CELL DEATH) DOMAIN PROTEIN-RELATED 353 808 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0430 Pvu-Chr3 4646858 4652714 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1008 2 18943568 18947419 Pvu3g0430 3 4646858 4652714 PCT