Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0396 ATGGCTTTTATGTCGGAGGTCAACATGAGCTTCTCTCACTACATGGATGATGAATACGAGAAACTCTTCCGGAGAATGAACCCTCCCAGGGTTGTAATCGATAATGAAGCCTGCAAGAATGCCACTGTTATAAGGGTTGATAGTGCAAACAAGCATGGAATACTTCTTGAAGTTGTACAGATCCTTACTGATCTAAACCTCATCATAACCAAGGCTTACATATCTTCTGATGGTGGATGGTTCATGGATGCTTTTAATGTTACTGGACAAGATGGAAACAAGGTTACTGATGAAGCCATTTTGGATTACATTAGAAAGTCTCTTGGTCCCGAATCTTGTGTTACTTCTCCCATTAGATCTGTTGGGGTTGAGCAAACAATGGACCACACAGTAATTGAGCTTATGGGAAGTGATAGGCCAGGATTGCTTTCCGAAGTCAGTGCTGTTTTGACCAACCTCAAGTGCAATATAGTGAATGCAGAGGTGTGGACTCACAACACCCGGGCAGCAGCTGTAATGCACGTGACAGATGAAGAGACCGGATCTGCTATCACTGACCCTAAGAGGCTCTCTATAGTCAAGGAACTTCTATGCAATGTGCTTGGCGGTGGCAACAAGAAGAGGGGAGCTAAAACTGTTGTCACAGATGAAGTCACACACACTGAGAGAAGGCTTCACCAAATGATGTTTGCTGATAGGGATTATGAACGAGATAGTGATGACGCCTTTGATGAGAAGCAAAGGCCAAATGTGAATGTTGTGAATTGGTCTGACAATAATTATTCAGTGGTAACAATTCAGTGTAAGGACAGGCCAAAGCTTCTCTTCGACACAGTTTGTACTTTGACAGACATGGAGTATGTGGTTTTTCATGCAAAAATCGATGCCGAGGGGCCAGAAGCATATCAGGAATATTTCATCAAGCATATTGACGGGTCCCCTATGAAATCAGATGCAGAAAGGCAAAGAGTGATACAATGTCTTGCAGCTGCAATTGAGAGAAGAGTTTCGGACGGTTTGAAGCTAGAACTCTGCACCACCGACAGAGTCGGACTTCTATCTGATGTCACGCGTATCTTCAGAGAGAATAGCCTCACAGTTACAAGGGCAGAAGTGTCCACGAAAGGAGGCAAAGCTGTTAACACTTTCTATGTTCGTGGGGCATCTGGTTTCCCTGTTGATTTGAAGACCATAGAATCCATTAGGCAAACAATAGGCAACACAATCCTTAAAGTAAAGGGTAGCCCTTCAGAGATGAAATCTGTTCCTCAGGATTCTCCCTCCAGATCCCTGTTTAGTGGTCTTTTCAAGTCCAGATCTTTTGTGAACTTTGGCTTGGTTAAGTCTTATTCTTGA 1356 0.4351 MAFMSEVNMSFSHYMDDEYEKLFRRMNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYISSDGGWFMDAFNVTGQDGNKVTDEAILDYIRKSLGPESCVTSPIRSVGVEQTMDHTVIELMGSDRPGLLSEVSAVLTNLKCNIVNAEVWTHNTRAAAVMHVTDEETGSAITDPKRLSIVKELLCNVLGGGNKKRGAKTVVTDEVTHTERRLHQMMFADRDYERDSDDAFDEKQRPNVNVVNWSDNNYSVVTIQCKDRPKLLFDTVCTLTDMEYVVFHAKIDAEGPEAYQEYFIKHIDGSPMKSDAERQRVIQCLAAAIERRVSDGLKLELCTTDRVGLLSDVTRIFRENSLTVTRAEVSTKGGKAVNTFYVRGASGFPVDLKTIESIRQTIGNTILKVKGSPSEMKSVPQDSPSRSLFSGLFKSRSFVNFGLVKSYS* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0396 451 ProSiteProfiles ACT domain profile. 341 417 IPR002912 -
Pvu3g0396 451 CDD ACT_ACR_4 339 406 - -
Pvu3g0396 451 SUPERFAMILY ACT-like 126 177 IPR045865 -
Pvu3g0396 451 SUPERFAMILY ACT-like 337 406 IPR045865 -
Pvu3g0396 451 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 10 449 IPR040217 -
Pvu3g0396 451 CDD ACT_ACR_1 41 111 - -
Pvu3g0396 451 CDD ACT_ACR_3 261 335 - -
Pvu3g0396 451 CDD ACT_ACR_2 130 203 - -
Pvu3g0396 451 SUPERFAMILY ACT-like 38 106 IPR045865 -
Pvu3g0396 451 Gene3D - 340 413 - -
Pvu3g0396 451 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-LIKE ISOFORM X1 10 449 - -
Pvu3g0396 451 Pfam ACT domain 42 102 IPR002912 -
Pvu3g0396 451 Pfam ACT domain 130 183 IPR002912 -
Pvu3g0396 451 Pfam ACT domain 347 401 IPR002912 -
Pvu3g0396 451 ProSiteProfiles ACT domain profile. 131 218 IPR002912 -
Pvu3g0396 451 ProSiteProfiles ACT domain profile. 43 122 IPR002912 -
Pvu3g0396 451 Gene3D - 126 197 - -
Pvu3g0396 451 Coils Coil 451 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0396 Pvu-Chr3 3981624 3986088 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0396 3 3981624 3986088 Pvu3g0396 3 3981624 3986088 ECH