Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0350 ATGCATATAAATTTAACCCTTATCTCAGCAAAACTGGAGTCACCACCAAAGCAGATAGATTCCTACTTTTTCTCTACCAAAATCTTCAGCATGTTGATGAAATACTTGTCTGAATTCTACTCTCATATCAAATGGGTGTTGGATTTCCTTCTCTTTTTCCCTTTCTATACTCTCCATGATTCTCAAATGCCAATGATTGCAGAAGACCAAAGCATATGCTACTATGAACACACCCCTGACACAGAGGAAGATGATGACTGTGCTGTTTGTCTCAGCAAAATTGGAGATGGTGAAGAGATTAGAGTGCTTAGGTGTGAACATTTCTTTCACAGAAACTGCTTGGATCAATGGGTTGCTCTCAAAAACGGATCTTGCCCTCTCTGCAGAGACCCAGTTAGGCCAAGAAGAGCCATGAATGAGGTTGGAGCTGAAGTTTTGTGGTTTCAATTTTGCACTGTTCACACTAATGAACCTGATAGATGGTGGCTGCGTTGA 495 0.4101 MHINLTLISAKLESPPKQIDSYFFSTKIFSMLMKYLSEFYSHIKWVLDFLLFFPFYTLHDSQMPMIAEDQSICYYEHTPDTEEDDDCAVCLSKIGDGEEIRVLRCEHFFHRNCLDQWVALKNGSCPLCRDPVRPRRAMNEVGAEVLWFQFCTVHTNEPDRWWLR* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0350 164 PANTHER RING ZINC FINGER PROTEIN-RELATED 31 157 - -
Pvu3g0350 164 SUPERFAMILY RING/U-box 74 137 - -
Pvu3g0350 164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 138 IPR013083 -
Pvu3g0350 164 ProSiteProfiles Zinc finger RING-type profile. 87 129 IPR001841 -
Pvu3g0350 164 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED 31 157 - -
Pvu3g0350 164 SMART ring_2 87 128 IPR001841 -
Pvu3g0350 164 SMART ringv_2 86 129 IPR011016 GO:0008270
Pvu3g0350 164 Pfam Ring finger domain 85 129 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0350 86 132 C3H Transcription Factor Family AT1G15100 53.191 3.89e-13 61.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0350 3 3348176 3348881 Pvu3g0350 3 3348176 3348881 ECH