Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0341 ATGGAGGGTCTTCCACAAGGCTACCGTCCCAACGTTGGTGTCTGTCTCATCAACTCCGATGACCAGATTTTTGTGGCTTCTAGGTTGAATGTCCCAGGAGCATGGCAAATGCCTCAGGGGGGAATTGAAGAAGGCGAGGAGCCCAAATCTGCTGCCATTAGGGAGCTTCGAGAAGAAACTGGCATAGTATCTGCTGAGATCATTGCTGAGGTTCAGAAATGGTTGACATATGACTTCCCTCCTGCTGTGAAGGCTAAAGTCAATCGCCTTTGGGGAGGTGAATGGCATGGACAGGCGCAAAAGTGGTTTCTTATGAGATTAACAAAAGATGACAGTGAGGTCAACTTGGCCAATGGGGAAGCAGAACCTGAATTTGCAGAGTGGAAATGGGCAGACCCTGAAGAAGTTATTGAGCAGGCAGTCGACTACAAGAGACCAACCTACGAAGAGGTTATAAGAACCTTCAAGCCTTACTTTCAAGGGAGTGCAATATCTGGCAAATGTAAATCAACAAAGTGGTGA 522 0.4732 MEGLPQGYRPNVGVCLINSDDQIFVASRLNVPGAWQMPQGGIEEGEEPKSAAIRELREETGIVSAEIIAEVQKWLTYDFPPAVKAKVNRLWGGEWHGQAQKWFLMRLTKDDSEVNLANGEAEPEFAEWKWADPEEVIEQAVDYKRPTYEEVIRTFKPYFQGSAISGKCKSTKW* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0341 173 Pfam NUDIX domain 8 150 IPR000086 -
Pvu3g0341 173 Hamap RNA pyrophosphohydrolase [rppH]. 2 160 IPR022927 -
Pvu3g0341 173 SUPERFAMILY Nudix 7 157 IPR015797 -
Pvu3g0341 173 ProSiteProfiles Nudix hydrolase domain profile. 7 153 IPR000086 -
Pvu3g0341 173 CDD Ap4A_hydrolase_plant_like 7 155 IPR022927 -
Pvu3g0341 173 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 1 159 - -
Pvu3g0341 173 PANTHER UDP/ADP-SUGAR PYROPHOSPHATASE 1 173 - -
Pvu3g0341 173 PRINTS NUDIX hydrolase family signature 35 49 IPR020476 -
Pvu3g0341 173 PRINTS NUDIX hydrolase family signature 49 64 IPR020476 -
Pvu3g0341 173 PANTHER BNACNNG74470D PROTEIN 1 173 - -
Pvu3g0341 173 ProSitePatterns Nudix box signature. 40 61 IPR020084 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0341 Pvu-Chr3 3264030 3267310 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0341 3 3264030 3267310 Pvu3g0341 3 3264030 3267310 ECH