Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0329 ATGGACAATAGTATTCTGGGTCTTCTCAAACTTCGAATTAAAAGAGGTATTGATCTTGCAATTCGTGATGCCATTAAAGGACGTGCCAGTGACCCTTATGTCGTCGTCAACATGGGTGATCAGAAGCTAAAGACTAGTGTTATAAAAAACAACTGCAATCCTGAGTGGAACGAAGAAAGGACCATTTCTATAAAGGACGTTACAACCCCAATACGTCTGGCAGTTTATGACAAAGACACATTCTCAGGGGATGACAAAATGGGAGATGCAGATATAGACTTAAAACCATATATTCAGTGTGTGCAAAGAGGGTTAAGTAACCTCCCAGAGGGTTCTGTAGTGGCCACGATTCAACCAGATGAAACTAATTGTCTTGCCAAAGAAAGCACCTGCATTTGGCGAGACGAAAACATCATCCAAGAAATGGTTTTGAGACTTAGAAATGTTGAGAGTGGGGAAATACTTGTGGAAATTGAGTGGGTTGATGTTATTGGTTGCAAGGGCTTATCACATCTACAACTTTGA 525 0.4076 MDNSILGLLKLRIKRGIDLAIRDAIKGRASDPYVVVNMGDQKLKTSVIKNNCNPEWNEERTISIKDVTTPIRLAVYDKDTFSGDDKMGDADIDLKPYIQCVQRGLSNLPEGSVVATIQPDETNCLAKESTCIWRDENIIQEMVLRLRNVESGEILVEIEWVDVIGCKGLSHLQL* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0329 174 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 4 167 IPR044562 -
Pvu3g0329 174 SMART C2_3c 8 106 IPR000008 -
Pvu3g0329 174 Pfam C2 domain 8 96 IPR000008 -
Pvu3g0329 174 Gene3D C2 domain 5 166 IPR035892 -
Pvu3g0329 174 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
Pvu3g0329 174 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 4 167 - -
Pvu3g0329 174 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 161 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0329 Pvu-Chr3 3072941 3076157 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0329 42 171 C2H2 Transcription Factor Family AT1G70790 57.576 2.04e-51 160
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0329 3 3072941 3076157 Pvu3g0329 3 3072941 3076157 ECH
Pvu3g0329 3 3072941 3076157 Pvu4g1597 4 43186492 43189050 ECH
Pvu3g0329 3 3072941 3076157 Pvu1g2386 1 49208369 49210769 ECH