Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0294 ATGGGACCTCTCATTTACCTATTCCCACTTTTGCTTCTGCTGTGCTTATCTCCGTTAGCACTCTCTCGAACCGCACCGCACACTCCCAAAACGACACTCCTAGACGTCGTTTCCTCCCTTCAAAACGCCCACAATGCCGTCGTTTCACCCCATTACCACCCTCTTCAACGACAAGAAGAAACTTCTCTTCTGTCGTCGTTTTCTGTTCAACTGCATTCCCGTGCCTCCATTCAGAAACCCTCTCACAGTGACTATAAATCGTTAACCCTATCGCGACTCGCGCGCGACTCAGCCCGAGTCAGGGCCCTGCAAACTCGTTTAGATCTTGCTCTTAATCGCGTCTCGAACTCGGATCTCCACCCGGCCGAGTCACGCTCCGAGTTCGAAGCCAATGCGCTCCAGGGCCCAATCGTGTCGGGAACGAGTCAGGGAAGCGGCGAGTATTTCCTCCGAGTTGGAATTGGAAAGCCTCCCAGTCAAGCCTACGTGGTTCTCGACACTGGAAGTGACGTCAGTTGGATCCAATGCGAGCCATGCTCCGAATGCTACCAACAATCCGACCCGATTTTTGACCCGCTTTCGTCCTCCTCCTATGCGCCTATCCACTGCGACGCTCCGCAGTGTAAATCCCTCGACCTCTCCGAGTGCCGCAACGGAACCTGTCTGTATGAAGTTTCCTACGGCGACGGATCTTACACCGTCGGCGAGTTCGCCACGGAGACCGTCACTCTCGGCGCGTCGGCAGTCTCCGGTGTCGCCATCGGCTGCGGCCACAACAACGAAGGACTATTCGTCGGCGCTGCTGGTCTGCTCGGTCTCGGCGGCGGAAAACTCTCGTTCCCCGCGCAGGTCAACGCGACGTCGTTTTCGTACTGCCTCGTGGACCGTGACTCCGACGCCGTGTCCACTCTTGAGTTCGACTCGCCGATGCCGCGCAACGCCGTCACCGCACCGCTTATGCGGAACCCCGAGCTAGACACGTTCTATTACCTTGGCTTGAAAGGAATCAGCGTCGGCGGCGAGACTCTCCAGGTACCTGAGTCGAGCTTCGCGGTCGACGCCACCGGAGGAGGCGGCATCATTGTCGATTCCGGCACCGCCGTGACACGGCTACGGAGCGAGGTGTACGACGCGCTCCGCGACGCATTTGTGAGGGGGACGAAGGGGTTGCCGAAGACGAACGGCGTGTCGTTGTTCGACACGTGCTACGACTTGTCGTCGAGGAACAGTGTGGACGTGCCGACAGTGTCGCTTCATTTTCCTGAGGGGAGGGAGTTACCGTTACCGGCGAAGAATTACCTGATACCGGTTGACTCGGTGGGGACGTTTTGCTTCGCGTTTGCGCCAACGACGTCGTCGTTGTCTATCATTGGAAATGTGCAGCAACAAGGGACACGTGTCAGTTTCGATATCGGTAACTCGCTCGTTGGATTCTCTGCCAATAGCTGCTAA 1452 0.5723 MGPLIYLFPLLLLLCLSPLALSRTAPHTPKTTLLDVVSSLQNAHNAVVSPHYHPLQRQEETSLLSSFSVQLHSRASIQKPSHSDYKSLTLSRLARDSARVRALQTRLDLALNRVSNSDLHPAESRSEFEANALQGPIVSGTSQGSGEYFLRVGIGKPPSQAYVVLDTGSDVSWIQCEPCSECYQQSDPIFDPLSSSSYAPIHCDAPQCKSLDLSECRNGTCLYEVSYGDGSYTVGEFATETVTLGASAVSGVAIGCGHNNEGLFVGAAGLLGLGGGKLSFPAQVNATSFSYCLVDRDSDAVSTLEFDSPMPRNAVTAPLMRNPELDTFYYLGLKGISVGGETLQVPESSFAVDATGGGGIIVDSGTAVTRLRSEVYDALRDAFVRGTKGLPKTNGVSLFDTCYDLSSRNSVDVPTVSLHFPEGRELPLPAKNYLIPVDSVGTFCFAFAPTTSSLSIIGNVQQQGTRVSFDIGNSLVGFSANSC* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0294 483 Gene3D Acid Proteases 307 483 IPR021109 -
Pvu3g0294 483 CDD cnd41_like 147 483 IPR033873 -
Pvu3g0294 483 ProSiteProfiles Peptidase family A1 domain profile. 148 479 IPR033121 -
Pvu3g0294 483 PANTHER ASPARTYL PROTEASES 17 483 IPR001461 GO:0004190|GO:0006508
Pvu3g0294 483 Pfam Xylanase inhibitor N-terminal 148 305 IPR032861 -
Pvu3g0294 483 SUPERFAMILY Acid proteases 141 483 IPR021109 -
Pvu3g0294 483 Gene3D Acid Proteases 121 306 IPR021109 -
Pvu3g0294 483 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 17 483 - -
Pvu3g0294 483 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 163 174 IPR001969 GO:0004190|GO:0006508
Pvu3g0294 483 Pfam Xylanase inhibitor C-terminal 329 479 IPR032799 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0294 Pvu-Chr3 2705223 2707121 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0294 138 483 Miscellaneous Gene Families AT1G77480 25.263 7.88e-23 99.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0294 3 2705223 2707121 Pvu3g0294 3 2705223 2707121 ECH