Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0281 ATGGCCACTGTTGCAACTACAGGAATTGGTGTAGGAGTTACAAAGCTCCAACAGCTCGAAAAACCAAAGCACAAGTCCTTGTTTCTTGGCCAGAGGCTTAGGATTAGACCCTCTGGGCAGGCTCAATGCAGTGCAAGATTCAATGTCTCAACCCCAAGAGTGGTTCAAGTTTTTGCACTAGGGGGTGAATGGATTGACACAGTTCACAACCTTTTTGTGGGTGTTGGGGTTGGACTTCCTTGCAGTGTGATGCAGTGTGGGGATGTAATCTATAGGAGCACTCTTCCCAAGTCCAATGCCTTGACACTCACTGTCCCTGGGGTGATTCTGGCTTTGGGGACTCTATCTTACCTTTGGGCCACACCTGGTGTGGCACCTGGTTTCTTTGACATGTTTGTTCTTGCCTTTGTTGAGAGGTTCTTCCGACCCAGTTACAAGAAGGATGATTTTGTTCTGGGGAAGAAGTTGGGGGAGGGATCATTTGGAGTGGTTTATAGAGTGTCACTGGCCAACAAACCCTCTTCAAAGGAAGGTGACTTAGTCTTGAAGAAGGCGACTGAATATGGTGCTGTTGAAATTTGGATGAATGAGCGTGTACGAAGAGCTTGTGCAAGCAGCTGTGCAGATTTTGTCTATGGTTTTCTTGAGAGCTCTTCTAAGAAATCTGCTGCTGAATACTGGCTTATATGGCGATTTGAAGGGGATGCCACCCTAGCTGACTTGGTGCAGAGTAGAGAGTTTCCATATAATGTTGAAACATTAATTTTGGGTGAGGTTCAAGACTTGCCCAAAGGATTGGAAAGAGAAAATAGAATCATTCAGACAATCATTAGACAAATATTGTTTGCACTGGATGGTCTTCATTCAACTGGTATTGTGCATAGGGACATTAAGCCACAGAACATTATTTTCTCCGAAGAGTCTCGTACATTCAAAATCATTGATCTTGGAGCTGCTACAGACCTGCGAGTGGGCATAAACTACATTCCAAAGGAGTTTCTTTTGGATCCAAGATATGCTGCACCAGAGCAGTACATCATGAGCACACAAACTCCTTCAGCACCCTCAGTTCCAGTTGCAACTGCACTTTCCCCAGTCTTATGGCAGTTGAATTTGCCAGACAGATTTGACATCTATAGTGCTGGTTTAATCTTTCTTCAAATGGCCTTCCCTGGTCTACGGTCTGATAATAGCCTCATTCAATTCAACCGGCAATTAAAGAGGTGTGACTATGACATAGTTGCATGGAGAAAAAGTTTAGAGACTAGATGCAGCCCTGAACTGAGGAGGGGTTTTGAGATGTTGGATTTGGATGGTGGAATAGGATGGGAACTTCTAAAATCAATGGTAAGGTACAAAGCAAGACAAAGGCTGAGTGCCAAAGCAGCATTGGCTCATCCTTACTTTGACAAAGAAGGATTGATGACACTGTCTTTCATGCAAACACTGAGGCTGCAGCTCTTGCGTGCAACTCAGCAGGACTATGGAGAAGCTGCCAAGTGGATTACTAATCTAATGGCAAAATCAGGGACACAGAAAGATGGTGGATTCACTGAGGCTCAGCTTCAGGAACTGAGAGAAATTGAACCCAAAAAGAAGGCTAATGCACCAAGAAATGCTCTAGCTTCAGCTCTTAAACTTCAGAGGAAACTTTTAAGAACCTTAAATGAGAGTATGGATGAGCTCAACAGACGCAGGAAAAGCTTTTGGTGGAGCAGATGGATCCCAAGAGAAGAATGA 1740 0.4431 MATVATTGIGVGVTKLQQLEKPKHKSLFLGQRLRIRPSGQAQCSARFNVSTPRVVQVFALGGEWIDTVHNLFVGVGVGLPCSVMQCGDVIYRSTLPKSNALTLTVPGVILALGTLSYLWATPGVAPGFFDMFVLAFVERFFRPSYKKDDFVLGKKLGEGSFGVVYRVSLANKPSSKEGDLVLKKATEYGAVEIWMNERVRRACASSCADFVYGFLESSSKKSAAEYWLIWRFEGDATLADLVQSREFPYNVETLILGEVQDLPKGLERENRIIQTIIRQILFALDGLHSTGIVHRDIKPQNIIFSEESRTFKIIDLGAATDLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSVPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPGLRSDNSLIQFNRQLKRCDYDIVAWRKSLETRCSPELRRGFEMLDLDGGIGWELLKSMVRYKARQRLSAKAALAHPYFDKEGLMTLSFMQTLRLQLLRATQQDYGEAAKWITNLMAKSGTQKDGGFTEAQLQELREIEPKKKANAPRNALASALKLQRKLLRTLNESMDELNRRRKSFWWSRWIPREE* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0281 579 PANTHER SERINE/THREONINE-PROTEIN KINASE STN7, CHLOROPLASTIC 13 579 - -
Pvu3g0281 579 SUPERFAMILY Protein kinase-like (PK-like) 135 472 IPR011009 -
Pvu3g0281 579 SMART serkin_6 150 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0281 579 Gene3D Transferase(Phosphotransferase) domain 1 260 475 - -
Pvu3g0281 579 CDD STKc_SNT7_plant 154 469 - -
Pvu3g0281 579 ProSitePatterns Protein kinases ATP-binding region signature. 156 183 IPR017441 GO:0005524
Pvu3g0281 579 Coils Coil 545 565 - -
Pvu3g0281 579 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 13 579 IPR044803 GO:0004674|GO:0009579
Pvu3g0281 579 ProSiteProfiles Protein kinase domain profile. 150 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0281 579 Gene3D Phosphorylase Kinase; domain 1 137 231 - -
Pvu3g0281 579 Pfam Protein kinase domain 152 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0281 579 ProSitePatterns Serine/Threonine protein kinases active-site signature. 292 304 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0281 Pvu-Chr3 2472952 2478160 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0281 269 470 Core Cell Cycle Gene Families AT2G38620 29.577 6.87e-16 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Pvu3g0281 Pkinase 9.5e-19 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0281 3 2472952 2478160 Pvu3g0281 3 2472952 2478160 ECH