Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0275 ATGTCTTCTTCTTCTTCACACAACTCTTTCCTCTCCTTCGTCTTCTTCTTCATCATTCTCACCCTCACACATTCGTCCACTGAGTACCTCAAGTTACCGTTACTCCCTCGAACAACACTATCCAACGTCTCCAACATCCTCGCCGCCGACCTCCACCGCCTCTCCGGCCGGCGCACTTCTCCCCAGTCCCCGCTCACTTCCGGCGCTGCCATGGGCTCCGGACAGTACTTTGCGGACCTCCGCATCGGATCCCCGCCGCAGCGCCTCCTCCTGGTAGTCGACACCGGCAGCGACCTCGTCTGGGTGAAATGCTCCGCCTGTCGTAACTGCTCCACCAACCGTCCCGGATCCGCATTTCTGCCCCGACATTCCAGAAGCTTCTCCCCTTACCACTGCTACGACTCGCTCTGTCGATTGGTTCCTCACCCCACCCCCACACACTGCAACAACCGCACCAAACTCCACACACCCTGCCGCTACGAATATTCCTACGCGGACGGGTCCACCACAACGGGCTTCTTCTCCAAGGAAACGACGACGTTCAACACCAGCTCCAAGAAACAAGAGAAAATTAAAAACCTGGCATTCGGGTGCGGGTTTAAAAACTCAGGTCCCAGCGTAACAGGTTCCAGCTTCAACGGTGCGCAGGGCGTAATGGGACTGGGCCGTGGGCCCATTTCGTTTTCTTCCCAACTTGGCCGCAAATTCGGGAACACCTTCTCTTACTGTCTACTCGACTACACCCTATCCCCGCCCCCCAAAAGCTACCTCACCATCGGTGCCTCCTCACACGATGTCGTTTCGCGGAAGTTGTTCAGCTACACGCCGTTAGTGACTAACCCTCTATCTCCCTCGTTTTACTACATCACCATTCAGAGTGTCTCCGTCGACGGCGTCAGGTTACCGATAAACCCTTCCGTTTGGGGCATCGACGAGAACGGAAACGGTGGCACCGTCGTGGACTCCGGCACCACGCTCTCTTTTCTAGCGGAGCCAGCTTATAAGCAGGTTCTGGCCGCGTTCCGGCGGCGCGTGAGGCTTCCTGCGGCGGAGGAAGCCGCTGCGCTCGGGTTCGACCTTTGTGTTAACGTCTCCGGCGTGGCAAGGCCGAGGCTGCCGAAGCTGAGATTCGTCCTCGCCGGAAAATCGGTGCTGTCGCCGCCGGCAGGGAATTATTTTATTGAGCCGGTGGAGGGAGTAAAGTGCCTCGCGGTTCAGCCGGTTCGACCGGGTTCTGGTTTTTCTGTGATTGGGAACTTGATGCAGCAAGGGTATTTGTTTGAATTCGACTTGGACCGGTCGCGGGTCGGGTTTTCGCGTCACGGGTGTGCGGTTCGCTAA 1341 0.5742 MSSSSSHNSFLSFVFFFIILTLTHSSTEYLKLPLLPRTTLSNVSNILAADLHRLSGRRTSPQSPLTSGAAMGSGQYFADLRIGSPPQRLLLVVDTGSDLVWVKCSACRNCSTNRPGSAFLPRHSRSFSPYHCYDSLCRLVPHPTPTHCNNRTKLHTPCRYEYSYADGSTTTGFFSKETTTFNTSSKKQEKIKNLAFGCGFKNSGPSVTGSSFNGAQGVMGLGRGPISFSSQLGRKFGNTFSYCLLDYTLSPPPKSYLTIGASSHDVVSRKLFSYTPLVTNPLSPSFYYITIQSVSVDGVRLPINPSVWGIDENGNGGTVVDSGTTLSFLAEPAYKQVLAAFRRRVRLPAAEEAAALGFDLCVNVSGVARPRLPKLRFVLAGKSVLSPPAGNYFIEPVEGVKCLAVQPVRPGSGFSVIGNLMQQGYLFEFDLDRSRVGFSRHGCAVR* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0275 446 Gene3D Acid Proteases 261 445 IPR021109 -
Pvu3g0275 446 Pfam Xylanase inhibitor C-terminal 287 439 IPR032799 -
Pvu3g0275 446 PANTHER OS07G0603500 PROTEIN-RELATED 23 445 - -
Pvu3g0275 446 SUPERFAMILY Acid proteases 70 443 IPR021109 -
Pvu3g0275 446 PANTHER BNAA02G27600D PROTEIN 23 445 - -
Pvu3g0275 446 PRINTS Pepsin (A1) aspartic protease family signature 82 102 IPR001461 GO:0004190|GO:0006508
Pvu3g0275 446 PRINTS Pepsin (A1) aspartic protease family signature 318 329 IPR001461 GO:0004190|GO:0006508
Pvu3g0275 446 PRINTS Pepsin (A1) aspartic protease family signature 415 430 IPR001461 GO:0004190|GO:0006508
Pvu3g0275 446 Gene3D Acid Proteases 52 260 IPR021109 -
Pvu3g0275 446 ProSiteProfiles Peptidase family A1 domain profile. 76 439 IPR033121 -
Pvu3g0275 446 Pfam Xylanase inhibitor N-terminal 76 260 IPR032861 -
Pvu3g0275 446 CDD pepsin_A_like_plant 75 443 IPR034161 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0275 Pvu-Chr3 2397582 2398922 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0275 53 443 Miscellaneous Gene Families AT1G77480 25.854 7.76e-24 101
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0275 3 2397582 2398922 Pvu3g0275 3 2397582 2398922 ECH