Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0264 ATGGCGTCTGAAAGCGCTTCTCGATCGAGTTCCGCTGCCGATTCCTACATTGGGAGCTTGATAAGCTTGACCTCAAAGAGTGAGATCAGATACGAAGGCATTCTCTACAACATCAACACTGAAGAGTCCAGTATTGGCCTTAGAAACGTGCGATCTTTTGGAACAGAAGGAAGGAAAAAGGATGGCCAACAAATTCCTCCTGGTGACAAGGTTTATGAGTATATACTTTTTCGTGGGACTGACATCAAGGATTTACAGGTTAAATCTTCTCCACCTGTCCAACCTACCCCACAAGTCAACAACGACCCAGCTATTATTCAGTCTCACTATGCTCGCCCAGTTGCCACATCTACAAGTTTGCCTTCGGCTGTAAGTGGGTCTGTGACTGATCTTAGCTCTCATACCCCCCAGCTTGGACATCCTGGGTCAAATTTTCAAGGGCCCTTGCCTTTGTATCAACCTGGAGGGAACATAGGATCATGGGGAGCTTCTCCAGCTGCTCCAAATACAAATGGTAGTAGACTTGCTATGCCAATGTATTGGCAAGGATATTATGGTGCCCCAAATGGGCTTCCTCATTTACACCAACAATCTCTGCTTCAACCACCACCTGGTTTATCAATGCCTTCATCTATGCAGCAGCCAATGCAGTATCCCAATTTCAGTCCTATACCTACTGTATCTTCTAATTTGCCAGAATTACCATCATCTTTGCTGCATGTGAGTTCTAGTATCTCTAGTGTAACATCTTCATTGCCTTCAGCACCATCTACTTTGCCTCCTGCACCATCTGCTTTGCCTCCTGCTCCTTCTGCTTTGCCTCCTGCACCTTCTACTTTGCCTACTGCACCTTCTGCTTTGCCTCTTGCACCTTCTGCTTTGCCTCATGCATCTTCTGCCTTATCTCCTGTACCCTCTGCAACACTTGCTTCTGAAATTTTACCAGTATCAGTAACAAACAAGGCACCCAATGTTTCAAATTCAGCAGTCAGTTTAGCCACTAACTTACCATCACTGACTTCCCTGACCAATTCTGGTTCTGATATAAATGCTTTAGTGCCACCAATCTCCAGTAAACCAAATGCAATTTCAGGTTTAAGTTTGCCCTATCAAACTGTATCCCAGTTGTCTCCTGCTGTTGTTGGATCATCAACTTCTATACATGCAGAAACATCAACTCTTTCTCTGATAACCCCAGGTCAATTATTGCAACAAGGACCAACTATAGTTTCTTCTGCTCAGCCTTCACAAGCATCTCATAAGGATGTTGAAGTGGTTCAGGTATCATCAACATCATCTCCTGAGATATCTCTGCCAGTTTCTGCTGCAATTCAACCACCAATTCTGCCATTGCCAGTAACTTCACGGTCCAGTCACAGGCCCGGTGGTGTTCCTACCCAATCTCATCATGGCTATAGTTATAGAGGACGTGGAAGAGGAAGAGGAACTGGGGGTCTACGCCCAGTCACAAAATTCACTGAAGATTTTGATTTCATTGCGATGAATGAGAAGTTCAATAAGGATGAAGTTTGGGGTCATCTTGGTAAAAACAAGTCTCATTCAAAGGATGGGGAAGGAAATGCCTTTGATGAAGATTATCAAGACGAAGAGATTGAAGATTTATCAAACTTTGACGTTAAGCCTATTTATAACAAGGATGACTTCTTTGATTCACTCTCTTCCAATGTGCATGATAATGCTCCACAGAATGGAAGGACTAGATACTCTGAACAAATCAAGATTGACACTGAGACATTTGGTGATTTTGTGAGGCACCGTGGTGGCCGTGGGGGTCGCGGCCCTGGCCGTGGTGGACGTTTTCGGGGTGGTTATTATGGAAGAGGAGGAGGGTATGGCTATTCTGGACGGGGTAGGGGCCGTGGTATGCCAGGTCGCAATTTGTAG 1905 0.4499 MASESASRSSSAADSYIGSLISLTSKSEIRYEGILYNINTEESSIGLRNVRSFGTEGRKKDGQQIPPGDKVYEYILFRGTDIKDLQVKSSPPVQPTPQVNNDPAIIQSHYARPVATSTSLPSAVSGSVTDLSSHTPQLGHPGSNFQGPLPLYQPGGNIGSWGASPAAPNTNGSRLAMPMYWQGYYGAPNGLPHLHQQSLLQPPPGLSMPSSMQQPMQYPNFSPIPTVSSNLPELPSSLLHVSSSISSVTSSLPSAPSTLPPAPSALPPAPSALPPAPSTLPTAPSALPLAPSALPHASSALSPVPSATLASEILPVSVTNKAPNVSNSAVSLATNLPSLTSLTNSGSDINALVPPISSKPNAISGLSLPYQTVSQLSPAVVGSSTSIHAETSTLSLITPGQLLQQGPTIVSSAQPSQASHKDVEVVQVSSTSSPEISLPVSAAIQPPILPLPVTSRSSHRPGGVPTQSHHGYSYRGRGRGRGTGGLRPVTKFTEDFDFIAMNEKFNKDEVWGHLGKNKSHSKDGEGNAFDEDYQDEEIEDLSNFDVKPIYNKDDFFDSLSSNVHDNAPQNGRTRYSEQIKIDTETFGDFVRHRGGRGGRGPGRGGRFRGGYYGRGGGYGYSGRGRGRGMPGRNL* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0264 634 CDD LSm14_N 16 87 IPR025609 -
Pvu3g0264 634 MobiDBLite consensus disorder prediction 250 284 - -
Pvu3g0264 634 PANTHER LSM DOMAIN, FDF DOMAIN, FFD BOX, DFDF DOMAIN, TFG BOX-RELATED 277 628 - -
Pvu3g0264 634 PANTHER LSM DOMAIN, FDF DOMAIN, FFD BOX, DFDF DOMAIN, TFG BOX-RELATED 1 259 - -
Pvu3g0264 634 MobiDBLite consensus disorder prediction 451 487 - -
Pvu3g0264 634 MobiDBLite consensus disorder prediction 591 611 - -
Pvu3g0264 634 ProSiteProfiles DFDF domain profile. 484 520 IPR025762 -
Pvu3g0264 634 SUPERFAMILY Sm-like ribonucleoproteins 15 92 IPR010920 -
Pvu3g0264 634 Gene3D - 6 92 - -
Pvu3g0264 634 Pfam Scd6-like Sm domain 16 89 IPR025609 -
Pvu3g0264 634 Pfam FDF domain 491 587 IPR019050 -
Pvu3g0264 634 PANTHER SCD6 PROTEIN-RELATED 1 259 - -
Pvu3g0264 634 PANTHER SCD6 PROTEIN-RELATED 277 628 - -
Pvu3g0264 634 ProSiteProfiles FFD box profile. 548 563 IPR025761 -
Pvu3g0264 634 ProSiteProfiles TFG box profile. 570 590 IPR025768 -
Pvu3g0264 634 SMART FDF_2 490 590 IPR019050 -
Pvu3g0264 634 MobiDBLite consensus disorder prediction 256 284 - -
Pvu3g0264 634 SMART LSM14_2 10 110 IPR025609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0264 Pvu-Chr3 2334584 2341044 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0264 3 2334584 2341044 Pvu3g0264 3 2334584 2341044 ECH