Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0255 ATGACGGACATCACTGACGACATAGCGGAGGAAATCTCCTTCCAAGACTTCGACGATGACTGCAATATGCTCGGAAGCCTTCTCAACGACATCTTGCAGAGAGAGGCTGGCCCAATCTTCGTCGACAAGCTTGAAAAAATTCGAGTCCTCGCTCAGAGCGCTTGTAATATGAGACATGCGGGGATTGAAGACATGGCTGAGCTGCTAGAGAAGCAATTGGCTTCAGAGTTATCCAAGATGACACTAGAAGAAGCTCTCACACTAGCTCGTGCCTTTAGTCATCATCTTACTTTGATGGGTATTGCTGAAACTCACCATAGGGTTCGTAAAGGAGGAAACCGGGCTCTTATTGCAAAATCTTGTGATGACATATTTAACCAGCTGTTGCAAGATGGAGTTACTCCAGATGAACTTTATAACTCGGTTTGCAAGCAGGAGGTCGAAATTGTTCTTACAGCTCACCCCACCCAAATTAATCGCCGTACCTTGCAATACAAACACATTAAAATTGCTCATCTTTTGGATTATAATGATCGACCTGATCTTGGCCATGAAGATCGAGATATGTTGATTGAAGATCTGGTGAGAGAGATAACTTCAATATGGCAGACAGATGAACTTAGGCGTGAAAAACCCACACCAGTCGATGAAGCCAGGGCCGGATTGAATATTGTGGAGCAATCACTCTGGAAAGCTGTTCCTCATTATTTACGTCGAGTTAGCAGCGCTTTAAGGAAGCACACAGGAAAACCACTTCCATTGACTTGTACTCCGATAAAGTTTGGATCTTGGATGGGAGGTGATAGAGATGGAAACCCAAATGTGACAGCTAAGGTCTCAAAAGATGTTTCACTTCTGTCGAGATGGATGGCAATTGACCTCTACGTTCGGGAAGTGGATAGCCTGAAATTTGAGCTATCCATGAAACGGTGCAGCGATAAGTTGTCAAAATTGGCACAGGAAATTCTGGAAGAAGCTAATGATGAGGAGAATCACCGTGAGCTTTGGAATGAATCTAGGAGTGTAAGTCAAATGAAGTATTCTAGCAAACAAGGTTCACCACTTCCAACTAAACTTCCATCTGGAGCTCATTTACCGTCTTGTGCTGAAAAGGGTGGATCTGAGCATCCCAGACTCATGCCAGGAGCTGATTACAAGCAATTCAATCCCAAGGGTGGCGAGATTTCAAGTTCAACTGAGAGCAGTGGTGGCAGTCCCAATGTCCGTTCATCAGTACCAATTTCACCAAATTCCAGTGCTTCTTCATTAGTTTCAATGACACGCTCTCCCTCTTTCAACTCTAGTCAACAACTTCTTGCTCAGAGGAAATTGTTTGCAGAATCCCAGACAGGAAGGACCAGTTTCCATAGGCTTTTGGAGCCAAAGCTACCTCAGCTTCCTGGAATTGCTCCGTATAGAGTGGTCCTTGGAAATGTCAAAGATAAGCTTCTGAGAACTCGTAGACGGTTGGAGCTTCTTCTCGAGGATGGTCCATGTGAACATAATCCTACGAATTATTATGAAACAACAGATCAGCTCTTGGAACCTTTGCTCCTTTGCTATGAATCTTTGCAATCATGTGGATCTGGGGTGCTAGCTGATGGTCGACTTGCTGATCTGATTCGAAGAGTTACTACTTTTGGCATGGTGTTAATGAAGCTTGACTTACGGCAGGAATCTGGCAGACATGCTGAAACGCTTGATGCAGTTACAAGGTATTTGGACTTGGGTACATACAGTGAGTGGGACGAAGAAAAAAAACTTAACTTCTTAACTAGAGAGCTGAAAGGGAAGAGACCACTGATTCCCCCTAGTATAGAGGTTGTTCCAGATGTTAGAGAAGTCTTGGACACGTTCCGAACTGCTGCTGAGTTAGGAAGCGATTCATTTGGTGCCTATGTGATCTCTATGGCCTCAAATGCCAGTGATGTTCTAGCAGTAGAGCTTTTGCAGAAGGATGCACGGCTTGCTGTTAGTGGAGAGTTAGGAAGAGCTTGTCCAGGTGGAACGCTGCGGGTGGTTCCTCTATTTGAAACTGTAAAGGACCTGAGAGGAGCTGGTTCAGTTATCAGAAAGCTTTTGTCAATAGATTGGTACCGGCAACACATCCTTAAAAACCATAATGGGCATCAAGAGGTCATGGTTGGGTATTCTGATTCTGGTAAAGATGCTGGGCGTTTCACTGCTGCTTGGGAACTCTACAAAGCTCAAGAAGATGTTGTGGCTGCATGCAAGGAGTATGGTATTAAGGTTACTCTCTTCCATGGCCGTGGAGGGAGTATTGGCCGCGGTGGTGGCCCAACATATATGGCCATTCAGTCTCAACCACCCGGCTCTGTCATGGGAACCCTTCGTACAACTGAGCAAGGAGAGATGGTGCAGGCCAAGTTTGGGTTGCCACAAACAGCTGTTAGACAACTTGAGATATACACAACAGCTGTCTTACTTGCTACCCTTCGTCCTCCTCTCCCACCGCGTGAAGAAAAGTGGCGCAATATGATGGAAGACATTTCAAATATCAGTTGCAAGTGTTACCGAAGTGTAGTGTATGAAAATCCAGAATTTCTGTCCTACTTCCATGAAGCCACACCTCAATCAGAGCTTGGCTTCCTCAACATCGGTAGCCGCCCCACAAGGCGGAAGAGCACCACTGGAATTGGCCACCTCCGTGCCATTCCCTGGGTGTTTGCATGGACTCAAACCAGGTTTGTTCTTCCAGCTTGGCTTGGAGTTGGAGCAGGTTTGAAAGGTGCTAGTGAGAAAGGACAAACTGAAGAGCTAAGGGCAATGTACAAAGAGTGGCCTTTCTTCCAAAGCACCATAGACTTGATTGAGATGGTTCTTGGAAAAGCAGACATTCCTATTGCCAAGCACTATGATGAAGTTCTTGTCTCTGAGAAAAGACAAAAACTTGGAAGTCAGCTAAGGGAAGAGCTCATCCAAACTGGGAAGTTTGTGTTATCTGTTAGTGGGCATGAGAAACCTCAGCAGAATAATAGGAGCTTAAGGAAACTGATTGAGAGCAGGCTTCCCTTCCTCAATCCCATGAACATGTTGCAGGTAGAGATTCTCAAGAGGCTAAGAAGTGATGATGACAACCTTAAAGCCAGAGATGCCTTGCTTATCACCATAAATGGCATTGCTGCTGGGATGAGGAACACTGGTTAA 3168 0.4536 MTDITDDIAEEISFQDFDDDCNMLGSLLNDILQREAGPIFVDKLEKIRVLAQSACNMRHAGIEDMAELLEKQLASELSKMTLEEALTLARAFSHHLTLMGIAETHHRVRKGGNRALIAKSCDDIFNQLLQDGVTPDELYNSVCKQEVEIVLTAHPTQINRRTLQYKHIKIAHLLDYNDRPDLGHEDRDMLIEDLVREITSIWQTDELRREKPTPVDEARAGLNIVEQSLWKAVPHYLRRVSSALRKHTGKPLPLTCTPIKFGSWMGGDRDGNPNVTAKVSKDVSLLSRWMAIDLYVREVDSLKFELSMKRCSDKLSKLAQEILEEANDEENHRELWNESRSVSQMKYSSKQGSPLPTKLPSGAHLPSCAEKGGSEHPRLMPGADYKQFNPKGGEISSSTESSGGSPNVRSSVPISPNSSASSLVSMTRSPSFNSSQQLLAQRKLFAESQTGRTSFHRLLEPKLPQLPGIAPYRVVLGNVKDKLLRTRRRLELLLEDGPCEHNPTNYYETTDQLLEPLLLCYESLQSCGSGVLADGRLADLIRRVTTFGMVLMKLDLRQESGRHAETLDAVTRYLDLGTYSEWDEEKKLNFLTRELKGKRPLIPPSIEVVPDVREVLDTFRTAAELGSDSFGAYVISMASNASDVLAVELLQKDARLAVSGELGRACPGGTLRVVPLFETVKDLRGAGSVIRKLLSIDWYRQHILKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACKEYGIKVTLFHGRGGSIGRGGGPTYMAIQSQPPGSVMGTLRTTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATLRPPLPPREEKWRNMMEDISNISCKCYRSVVYENPEFLSYFHEATPQSELGFLNIGSRPTRRKSTTGIGHLRAIPWVFAWTQTRFVLPAWLGVGAGLKGASEKGQTEELRAMYKEWPFFQSTIDLIEMVLGKADIPIAKHYDEVLVSEKRQKLGSQLREELIQTGKFVLSVSGHEKPQQNNRSLRKLIESRLPFLNPMNMLQVEILKRLRSDDDNLKARDALLITINGIAAGMRNTG* 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0255 1055 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 17 1055 IPR015813 GO:0003824
Pvu3g0255 1055 MobiDBLite consensus disorder prediction 342 356 - -
Pvu3g0255 1055 Gene3D Phosphoenolpyruvate/pyruvate domain 289 352 - -
Pvu3g0255 1055 Gene3D Phosphoenolpyruvate/pyruvate domain 420 549 - -
Pvu3g0255 1055 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 150 161 IPR018129 -
Pvu3g0255 1055 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 4 8 1055 - -
Pvu3g0255 1055 Pfam Phosphoenolpyruvate carboxylase 19 334 IPR021135 GO:0006099|GO:0008964|GO:0015977
Pvu3g0255 1055 Pfam Phosphoenolpyruvate carboxylase 462 1055 IPR021135 GO:0006099|GO:0008964|GO:0015977
Pvu3g0255 1055 PRINTS Phosphoenolpyruvate carboxylase signature 149 162 IPR021135 GO:0006099|GO:0008964|GO:0015977
Pvu3g0255 1055 PRINTS Phosphoenolpyruvate carboxylase signature 202 218 IPR021135 GO:0006099|GO:0008964|GO:0015977
Pvu3g0255 1055 PRINTS Phosphoenolpyruvate carboxylase signature 261 276 IPR021135 GO:0006099|GO:0008964|GO:0015977
Pvu3g0255 1055 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 713 725 IPR033129 -
Pvu3g0255 1055 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 8 1055 IPR021135 GO:0006099|GO:0008964|GO:0015977
Pvu3g0255 1055 MobiDBLite consensus disorder prediction 342 428 - -
Pvu3g0255 1055 MobiDBLite consensus disorder prediction 391 428 - -
Pvu3g0255 1055 Hamap Phosphoenolpyruvate carboxylase [ppc]. 9 1055 IPR022805 GO:0006099|GO:0008964|GO:0015977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0255 Pvu-Chr3 2244278 2255061 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0255 3 2244278 2255061 Pvu3g0255 3 2244278 2255061 ECH