Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0228 ATGTTGGCCTTCACTCTCCTACCTTCCTCCAAGCTCCACCCTTCGCATTTCCTTCCACCCGTCGCCGTCGCGGAAGCTCCTCCCAGAAACAGACTCGCAATCTTTCCCAAATCCATCTCCAAACTCGCTTTCGTTGCCAGGGCCACCAATGACGCTCGTGATGGGGCCGTCGACGCAACCTCTCCGCCGGGTGTTGATGCAGTAACAAGTACATCTTCTGGCCTCGGTGATGGTTATGTGGCCTTGTTTGTTCGTATGCTAGGCCTCGATCGTGACCCTCTGGATAGAGAACAAGCTATAATTGCACTATGGAAATATTCACTCGGTGGAAAGAAGTGTATAGACACTTTAATGCAGTTTCCTGGTTGTATTAATCTTGTTGTGAACCTCCTCAGATCAGAGTCTAGTTCTGCATGTGAGGCAGCTGCAGGCCTTCTGCGATCACTATCTTCAGTCAATCTATATAGAAATTCTGTAGCTGATAGTGGAGCAATAGAAGAGATAAACAGATTGCTGAGGAAATCTTCCTTGACTTCTGAGGTAAAGGAGCAGAGTTTGACTACACTGTGGAATTTATCTGTTGATGAGAAGCTCTGGATTAAAATTTCAAAGACTGAGATTCTGCTTGTAGCTATTAAGTACCTTGAAGACGAGGATATTAAAGTGAAGGAGGCTGCAGGGGGCATTTTGGCAAATTTAGCACTGAGCCGTGTTAACCACGGCATAATGGTCGAAGCGGGTGTTATACCAAAATTGGCAAAGTTCTTAACATCTGATCTGGAAGGATCTAAAGTTATTAGGAAGGAAGCAAGGAATGCATTGCTAGAACTTTTTAAGGACAATGATTATAAAATTCTTGTTATGGAGGAAGGCCTGGTTCCTGTGCCATTAATTGGTTCTGCGGCCTTTAAGTCATTCACCCCAGGCTTACATTTGTGGCCCACATTACCTGATGGTACAGAAATTGAAAGGACTTCTAGACAGCCATCCAAATATGGTGCTTCGGAATTACTTCTTGGATTAAACATTGATGACAAGAATGCTAACTTAGAGGAAGCAAAGGTCAGTGCAATTCTTGGACGAACCCAACAGCAATTCCTTGCTCGTGTTGGAGCTTTAGAAAGGGAAGGAAAGACTATACCTCATTCTGATTCCTCTAATGATCTGAGGTTTGCACTTTTACCTTGGACGGATGGTGTTGCTCGTCTAGCACTGATATTAGAACTGGAAGATAAGTCTGCATCAATAAAGGCCGCGGAATCAATTGCTACCGCATGTATCAATGAACATATGCGTATTGCATTCAGGGAGGCTGGAGTAATTAAGAATTTAATAAGGCTTTTGAACTGTGATGACGATGCAGTCCAGTTGGCGGTAACACAAGCTTTGGAAAGGCTGTCTGTTAGCAATATTGTTTGCCAGGTAATTGAAGCTGAAGGGGTTTTAGGTCCTTTGGTTAGTATTTTGAAACGGTCAGGGATAGCTGGAACTATTGTGGAAAAGTCTTTGAGTATACTAGCTCGGATATGTGACCTCAGTAAACAAAAGCAATTGAAGTTTTATGATGGACCAGTTAATGGATCTGAAAATGCATATGGTGGAGCAAAAAGTGACTGTGTTTCAACCAGGAATGACATACTAGATTCTGTTTTGATTGCACACCTTGTTGAGATTCTGAAGTCCTCTCCTCCTAATTTACAAGAAAAAGCTGCATCTGTGCTTGAGTTTGTGGCATTGATTGACTCCACCCTGTCCCCAATTTTATCTTTGGATATTGAATCTGGTCTCAGTTCTGCTTTTCAGCAAAAGATTTTGAAAATTTCAGGGGACATGGAATCTGATGCAGAAGATCAGTTTTATGCAACATATGCAATTGAATTTGAAGAAGCTGGTCTAGCAATATCTGCGGCATCGCGGTTATTGACAATACTACTCGATTGCGAGCAGTTCCGCAACAAAATAAATGCCCCCCATTTCATTGATTTGCTTCGTGGAATCCTCAGGTCTAATATTCCTCTCCACACCAAAGACTGGGTAGCTGCTTGCCTAGTTAAACTGAGTTCTCTCTCTGGCTCCCTCACCAGTTTCTATCCAATAAATGTGGAAGTTACACTTTATGAGACAATCCCAAGACTTCTAGAACAGATCAAAACTTCATTCTCCCCAAAAGCACAAGAAACTGCTGTTGTAGAACTTAATAGAATAATATCTGAAGGAGTGGTGGATTCCACAGACGAAGCTATTATTTCAGAGGGGGCAATAAGTTCATTGGTGAATCTGGTTGAAGAAGGTAGTGACAGGGCTGTTGAAGCAAGCTTGGCAATACTGTACAATCTGAGTATGAACAATGAGAACCATTCAGCACTGGTGGCGGCTGGAGCCGTGCAGGTCTTAAAAAGAATAGTTCTGTCAAACAGACCACACTGGGAACGGGCACTTCTTTTACTCAGGATTTTGCAACCGTGA 2466 0.429 MLAFTLLPSSKLHPSHFLPPVAVAEAPPRNRLAIFPKSISKLAFVARATNDARDGAVDATSPPGVDAVTSTSSGLGDGYVALFVRMLGLDRDPLDREQAIIALWKYSLGGKKCIDTLMQFPGCINLVVNLLRSESSSACEAAAGLLRSLSSVNLYRNSVADSGAIEEINRLLRKSSLTSEVKEQSLTTLWNLSVDEKLWIKISKTEILLVAIKYLEDEDIKVKEAAGGILANLALSRVNHGIMVEAGVIPKLAKFLTSDLEGSKVIRKEARNALLELFKDNDYKILVMEEGLVPVPLIGSAAFKSFTPGLHLWPTLPDGTEIERTSRQPSKYGASELLLGLNIDDKNANLEEAKVSAILGRTQQQFLARVGALEREGKTIPHSDSSNDLRFALLPWTDGVARLALILELEDKSASIKAAESIATACINEHMRIAFREAGVIKNLIRLLNCDDDAVQLAVTQALERLSVSNIVCQVIEAEGVLGPLVSILKRSGIAGTIVEKSLSILARICDLSKQKQLKFYDGPVNGSENAYGGAKSDCVSTRNDILDSVLIAHLVEILKSSPPNLQEKAASVLEFVALIDSTLSPILSLDIESGLSSAFQQKILKISGDMESDAEDQFYATYAIEFEEAGLAISAASRLLTILLDCEQFRNKINAPHFIDLLRGILRSNIPLHTKDWVAACLVKLSSLSGSLTSFYPINVEVTLYETIPRLLEQIKTSFSPKAQETAVVELNRIISEGVVDSTDEAIISEGAISSLVNLVEEGSDRAVEASLAILYNLSMNNENHSALVAAGAVQVLKRIVLSNRPHWERALLLLRILQP* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0228 821 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 122 164 IPR000225 GO:0005515
Pvu3g0228 821 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 752 794 IPR000225 GO:0005515
Pvu3g0228 821 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 163 196 IPR000225 GO:0005515
Pvu3g0228 821 Gene3D - 77 301 IPR011989 -
Pvu3g0228 821 Gene3D - 624 819 IPR011989 -
Pvu3g0228 821 SUPERFAMILY ARM repeat 83 297 IPR016024 -
Pvu3g0228 821 Gene3D - 383 585 IPR011989 -
Pvu3g0228 821 SMART arm_5 236 279 IPR000225 GO:0005515
Pvu3g0228 821 SMART arm_5 741 781 IPR000225 GO:0005515
Pvu3g0228 821 SMART arm_5 110 151 IPR000225 GO:0005515
Pvu3g0228 821 SMART arm_5 428 468 IPR000225 GO:0005515
Pvu3g0228 821 SMART arm_5 469 511 IPR000225 GO:0005515
Pvu3g0228 821 SMART arm_5 152 194 IPR000225 GO:0005515
Pvu3g0228 821 SMART arm_5 539 579 IPR000225 GO:0005515
Pvu3g0228 821 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 27 820 - -
Pvu3g0228 821 SUPERFAMILY ARM repeat 410 808 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0228 122 249 U-box Gene Family AT2G23140 34.375 8.64e-09 57.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0228 3 1945854 1955536 Pvu3g0228 3 1945854 1955536 ECH