Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0226 ATGGCCACTCTTCAGAGTTGGAGAAAAGCCTATGGCGCTCTCAAAGACTCCACCAAAGTTGGTCTCGCTCATGTCAATAGCTCTTACGCCGAGTTGGAAGTCGCCGTAGTCAAAGCCACCAACCACGTCGTGTGTCCTCCCAAGGAGAGATACCTTCGAAAAATTTTGCTCGCAACTTCTGCTGCACGGCCTAGAGCTGATGTTGCTTTCTGCATTCACGCGCTTTCGCGTCGGTTGGCCAAGACGCGAAACTGGACGGTGGCATTGAAAACATTAATCGTCATTCATAGGTTATTGAGAGAGGGTGATCCTACTCTTAGAGAAGAATTTCTTAATTTCGCACAGAGGGGGCGCATACTCCAACTTTCTAATTTCAGAGATGATTCTAGCCCAATAGCTTGGGAATGTTCTGCCTGGGTTCGTACTTATGCATTATATTTGGAAGAAAGACTTGAATGTTTCTGGATACTGAAGTATGATATTGAAGCTGAGCGTCTACCTAAGCCTGTTGCTGGGCAAGAAAAGGGATATAGCAGGACAAGGGATTTGAACAGTGAGGAGCTATTGGAGCACTTGCCTGCTTTGCAGCGGCTTCTCTATTGCCTTGTTGGTTGCCGTCCAGAAGGAGCAGCTTTTAGCAGCTATGTGATACAATATGCCCTGGCCCTGGTTTTAAAAGAAAGCTTTAAAATTTATTGTGCTATTAATGACGGCATTATCAATCTTGTTGATAAGTTTTTTGAGATGCTCAGGCATGAAGCTATCAAAGCCTTTGATGTCTATAAACGTGCAGGCCAGCAGGCAGAAAGTCTCTCTGATTTCTATGAAATATGCAAAAGATTGGAAATTGCTAGGAATTTTCAGTTTCCTGTTTTAACAGAGCCTCCACTATCATTTCTTGTTACCATGGAAGATTACATAAAGGATGCACCGCGACTGGTTACAGTTTCAAGCGAGCCATTATTACTGACTTACAGACCAGATGATGTTCCCACAATAGAATACAATAAATTATCTCAAGAACAGGAGCCCTCATTGCCAGTTGATGATGTTGTCTCAAATTCTGAGCTTGCTCCTCCTCCACCGTCTCACAACTATTTTGAAACTGGAGATTTACTGGGGTTGAATGACAGTACATCTGATGCATCCTTCATAGAAGAAAGAAACGCTCATGCCCTAGCCATAGTCCCTACCGAAATTGATTCACGTGCTGATCCGGCCAGAGATTTAGATCCAACCGGATGGGAGCTTGCTCTGGTCTCCACTCCAAGTACAACTGTTTCTCCAGTCAATGAGAGACAATTGGCTGGTAGGTTGAGTTCTCTCACCCTCAACAGCATATATGATCCAGGAGCATATAGATATGTACAACAACCTGCTTTTGGAGTGCCAGCTCCAAACCCATTCGAAGTGCAACATCCTTTTGGTTTGTCAACTAGCTTCCCTCGCCCACCCAACGTACAAATGGCAACAATTTCTCAAGAGCATATACATCATCCTTTCGGTCATTACCAACCATATCAGCATCAGCCTCTGCAGCAGCATATGCTGATGAGCCCAGCAAATCCCTTCGAAGATGCAGGATATGGGGCATTTCCTGTGCATCCTGTTTCTCACCCTCATAATAACAACCCATTTGGAAGCACTGGCATGATATAG 1659 0.4454 MATLQSWRKAYGALKDSTKVGLAHVNSSYAELEVAVVKATNHVVCPPKERYLRKILLATSAARPRADVAFCIHALSRRLAKTRNWTVALKTLIVIHRLLREGDPTLREEFLNFAQRGRILQLSNFRDDSSPIAWECSAWVRTYALYLEERLECFWILKYDIEAERLPKPVAGQEKGYSRTRDLNSEELLEHLPALQRLLYCLVGCRPEGAAFSSYVIQYALALVLKESFKIYCAINDGIINLVDKFFEMLRHEAIKAFDVYKRAGQQAESLSDFYEICKRLEIARNFQFPVLTEPPLSFLVTMEDYIKDAPRLVTVSSEPLLLTYRPDDVPTIEYNKLSQEQEPSLPVDDVVSNSELAPPPPSHNYFETGDLLGLNDSTSDASFIEERNAHALAIVPTEIDSRADPARDLDPTGWELALVSTPSTTVSPVNERQLAGRLSSLTLNSIYDPGAYRYVQQPAFGVPAPNPFEVQHPFGLSTSFPRPPNVQMATISQEHIHHPFGHYQPYQHQPLQQHMLMSPANPFEDAGYGAFPVHPVSHPHNNNPFGSTGMI* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0226 552 PANTHER OS05G0549000 PROTEIN 1 535 - -
Pvu3g0226 552 SUPERFAMILY ENTH/VHS domain 32 162 IPR008942 -
Pvu3g0226 552 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 535 IPR045192 GO:0048268|GO:0072583
Pvu3g0226 552 SMART enth_2 30 161 IPR013809 -
Pvu3g0226 552 Gene3D ANTH domain 173 322 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Pvu3g0226 552 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Pvu3g0226 552 Gene3D - 6 161 IPR008942 -
Pvu3g0226 552 CDD ANTH_N 32 154 - -
Pvu3g0226 552 Pfam ANTH domain 31 309 IPR011417 GO:0005543
Pvu3g0226 552 SUPERFAMILY GAT-like domain 178 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0226 Pvu-Chr3 1933560 1942022 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0226 3 1933560 1942022 Pvu3g0226 3 1933560 1942022 ECH