Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0220 ATGACACGTCATTTCCTTCTCCTTTCTCTGTTATTCTTTGCTTCCACACTCTCTCCTCTCATCTCAACCGTCACCGCCGGTTACACTTCCGGTGACGCTTCCGGTTACATTTCCGGTGATGCTTCCGGTGACACGGACTTCATTCGCCAAAGCTGCAACGCAACGTTGTACCCTGACCTGTGCTTCTCCTCGCTCTCTCCCTACGCCGCCGCGGTGCAACGCAGCCCCGGCGGCCTCGCGCGAGTGGCCGTGGCAGTGGCGCTTGCCAAGGCGCACGGCGCGGCGGCCTACCTCTCACACGAGACCGCCACGGCGCTCTCTGCGGATTCCGGCGACGGTGCCGGCGCCGCCGTGCACGACTGCTTCTCAAACCTGGAGGACGCGGTGGACGAGATCCGCGGCTCGCTGAAGCAGATGCGGCGCCTGAGACGACCGGACGGGGACTCCGGTTCGGTCCGGTTCGGGGTGAGCAACGTGCTGACGTGGATGAGCGCGGCGCTGACGGACGAGGAAACCTGCACGGACGGGTTCGAGGGCGTAGAGGAAGGTCCCGTGAAGACGAGCGTGTGCAACCGCGTGACCAGGGTGAAGAAGTTCACAAGCAATGCCTTGGCGCTGGTGAACGGTTTCGCTAATAATTTATAA 645 0.6233 MTRHFLLLSLLFFASTLSPLISTVTAGYTSGDASGYISGDASGDTDFIRQSCNATLYPDLCFSSLSPYAAAVQRSPGGLARVAVAVALAKAHGAAAYLSHETATALSADSGDGAGAAVHDCFSNLEDAVDEIRGSLKQMRRLRRPDGDSGSVRFGVSNVLTWMSAALTDEETCTDGFEGVEEGPVKTSVCNRVTRVKKFTSNALALVNGFANNL* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0220 214 Pfam Plant invertase/pectin methylesterase inhibitor 46 206 IPR006501 GO:0004857
Pvu3g0220 214 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 6 213 - -
Pvu3g0220 214 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 46 210 IPR035513 -
Pvu3g0220 214 PANTHER PECTINESTERASE INHIBITOR-LIKE 6 213 - -
Pvu3g0220 214 CDD PMEI-like_3 51 212 - -
Pvu3g0220 214 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 210 IPR035513 -
Pvu3g0220 214 SMART PMEI_2 43 206 IPR006501 GO:0004857
Pvu3g0220 214 TIGRFAM PME_inhib: pectinesterase inhibitor domain 14 208 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0220 Pvu-Chr3 1899388 1900246 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0220 45 214 Carbohydrate Esterase AT5G53370 29.070 2.91e-14 69.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0220 3 1899388 1900246 Pvu3g0220 3 1899388 1900246 ECH