Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3398 ATGGACGGATTACTCGGCCTTCTACGAATTCACGTCAAGCGTGGTGTCGACCTCGCCATTCGCGATGTCAGCACAAGTGATCCTTACGTTGTCGTTAAGATGGACAAGCAGAAGCTCAAAACCAGTGTCATCAAAAAGGATATTAACCCTGAGTGGAACGAAGATCTTACCTTTTCTGTCACAGATCCCTCTTGTCCATTGATAATGACTGTGTATGATCATGACACATTCAGCATGGATGACAAAATGGGAGATGCAGAATTTGATATCTCACCATATATAGAAGCAGTGAAGATGGAAGTGGATGATCTTCCGAATGGAACCATAATCACCAGAATGCTACCATGCAGGACGAACTGTCTGGCGGAGGAAAGTTGCGTGGTTTATGAGAATGGTAAAATTCTACAAAATGTTGTTCTAAGACTACGACATGTTGAATGTGGTGAGCTGGAATTTCAATTGGAATGGATTAGTCTTCCAGGGGCAAAGTCTTTAGCATAG 501 0.4291 MDGLLGLLRIHVKRGVDLAIRDVSTSDPYVVVKMDKQKLKTSVIKKDINPEWNEDLTFSVTDPSCPLIMTVYDHDTFSMDDKMGDAEFDISPYIEAVKMEVDDLPNGTIITRMLPCRTNCLAEESCVVYENGKILQNVVLRLRHVECGELEFQLEWISLPGAKSLA* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3398 166 CDD C2_ArfGAP 5 148 - -
Pvu2g3398 166 SMART C2_3c 7 102 IPR000008 -
Pvu2g3398 166 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4-LIKE 1 164 - -
Pvu2g3398 166 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Pvu2g3398 166 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 164 IPR044562 -
Pvu2g3398 166 Gene3D C2 domain 5 164 IPR035892 -
Pvu2g3398 166 PRINTS C2 domain signature 22 34 IPR000008 -
Pvu2g3398 166 PRINTS C2 domain signature 46 59 IPR000008 -
Pvu2g3398 166 PRINTS C2 domain signature 67 75 IPR000008 -
Pvu2g3398 166 Pfam C2 domain 6 92 IPR000008 -
Pvu2g3398 166 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 153 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3398 Pvu-Chr2 48827486 48828628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3398 38 166 C2H2 Transcription Factor Family AT1G70790 56.489 9.42e-50 155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3398 2 48827486 48828628 Pvu4g1597 4 43186492 43189050 PCT