Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3362 ATGGATGGAGAAGATCAAAAGTCATCTATACAATCTCCATTGATACATATCACGGTGGAAGATAGGCTCAAAGTTGATAGTATACAACTAAACAAGGATAAGGCAATAGAGAGAGCTGAACTCTATGAAGAAGTGAGGAAACAGTTATGGCTAGCAGGGCCTTTAGTATCTGTTTCTATATTAAATTATTCCCTACAAATTATATCTGTAATGTTTGTTGGGCATCTCGGCCAATTGCAACTCTCTGCTGCTTCATTGGCTACTTCTTTTGCCTCTGTCACTGGTTTTAGCTTATTGGTGGGGGTGGCTAGTGCTTTAGATACCTTGTGTGGCCAATCATATGGAGCAAAGCAGCACCATATGTTAGGCATACACATGCAGAGGGCTATGCTTGTTCTTATGATTGTTAGCATACACCTTGCATTTATTTGGGCAAACACAAGTTCCATTCTAACTGCCCTTGGCCAAGATCCTGAAATATCTGCAGAAGCTGGACAATATGCTCGGCTAATGATTCCAAGCCTTTTTGCCTATGGCCTTCTTCAGTGCCTGAACAAATTTTTGCAAACCCAAAATATAGTATTTCCAATGGTGTTCAGCTCTGGAGTCACTACTTTGCTGCATATTGCTATATGTTGGACTATGGTATTCAAATTTGGACTAGGGAACAGAGGAGCTGCCATAGCAAATGCTATATCCTACTGGATAAATGTCTTGATCCTGATACTCTATGTCAAGTTTTCTCCTTCATGTTCAAAAACATGGACTGGATTCTCAAAAGAGGCATTGCATGGCATCCCTTCTTTTCTTAGACTTGCAATTCCTTCAGCTGTTATGGTTTGCTTGGAAATGTGGTCATTTGAAATGATGGTTCTCCTCTCTGGCCTTCTTCCAAATCCAAAGTTAGAAGCATCAGTGCTTTCTATCTGTCTGAATACTTCGACAACTGCTTGGATGATCCCCTTTGGACTCAGTGGAGCTGTAAGCACTCGTGTCTCAAATGAACTAGGAGCAGGTCACCCACGGGCAGCACGGTTAGCTGTGTACTTTGTCTTTGTAATGGCCATTACCGAGGGAACATTAATTGGAGCAGTGATGATACTAATGCGCAACATTTGGGGCTATGCATATAGTAATGAAGTGGAGGTGGTTCAATATGTAGCTATCATGTTGCCAATTCTTGCGTTATCCATTTTCCTGGATGCACTACAGTGTGTTCTTTCAGGCACAGCTAGAGGATGTGGTTGGCAAAAGAAAGGGGCTCTGATTAATCTAGGATCATACTATTTAGTTGGGATTCCATCAGCTATCTATTTTTCTTTTGTCATGCACATTGGGGGGAAGGGGCTTTGGCTGGGGATCATATGTGCACTGGTTGTTCAGGTGTCATGCCTTTTTGTAATTACAGCACGCACTGACTGGGAGCAAGAGGCAAGGAAGGCTAAAGAAAGAGTCTACTGTTCAATGACAGCAGGGCATGAGGGAGATAGTTTCTGCACATGA 1503 0.4232 MDGEDQKSSIQSPLIHITVEDRLKVDSIQLNKDKAIERAELYEEVRKQLWLAGPLVSVSILNYSLQIISVMFVGHLGQLQLSAASLATSFASVTGFSLLVGVASALDTLCGQSYGAKQHHMLGIHMQRAMLVLMIVSIHLAFIWANTSSILTALGQDPEISAEAGQYARLMIPSLFAYGLLQCLNKFLQTQNIVFPMVFSSGVTTLLHIAICWTMVFKFGLGNRGAAIANAISYWINVLILILYVKFSPSCSKTWTGFSKEALHGIPSFLRLAIPSAVMVCLEMWSFEMMVLLSGLLPNPKLEASVLSICLNTSTTAWMIPFGLSGAVSTRVSNELGAGHPRAARLAVYFVFVMAITEGTLIGAVMILMRNIWGYAYSNEVEVVQYVAIMLPILALSIFLDALQCVLSGTARGCGWQKKGALINLGSYYLVGIPSAIYFSFVMHIGGKGLWLGIICALVVQVSCLFVITARTDWEQEARKAKERVYCSMTAGHEGDSFCT* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3362 500 TIGRFAM matE: MATE efflux family protein 54 451 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu2g3362 500 PANTHER MULTIDRUG RESISTANCE PROTEIN 29 484 - -
Pvu2g3362 500 CDD MATE_eukaryotic 44 480 IPR045069 GO:0042910|GO:1990961
Pvu2g3362 500 Pfam MatE 54 214 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu2g3362 500 Pfam MatE 275 436 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu2g3362 500 PANTHER PROTEIN DETOXIFICATION 29 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3362 Pvu-Chr2 48502924 48505936 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g0704 4 9282802 9285028 Pvu2g3362 2 48502924 48505936 ECH
Pvu2g3362 2 48502924 48505936 Pvu2g3362 2 48502924 48505936 ECH
Pvu2g3362 2 48502924 48505936 Pvu4g1612 4 43378013 43384543 PCT
Pvu4g1610 4 43356493 43361292 Pvu2g3362 2 48502924 48505936 PCT