Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3279 ATGAGAACCCAACGCATTCACCTTCTCCACCTCCTCCTCTCTCTCTTCCTCTTCGCAGCCGCATTCTCTCCGGTGGCCGCCGCCGCATACGACGCTTCAGCCCCCGCGCCTGACGACGGCGACACCGAGTTCATCCGCTCCAGCTGCAACACCACACTCTACCCCGACGTGTGCTTCACCTCCCTCTCCCGCTACGCCAATGCGGTGCAGCAGAACCCCGGCCAGCTGGCGCGCGTGGCCATCAGCGTCAGTCTCTCCAAGGCCCACCGCGCCGCCTCCTACATCTCCAACCTCACGCATGACGCCGACTACGGCACGAGCGGCTCGCGCGCGGCGCTAGCGCTTCACGACTGCTTCTCGAACCTCGGCGACGCCGTGGACGAAATCCGCGGCTCTCTGAAGCAGATGCGGCAGATTGGCGCAGCCGGCGAGGGCGCCGGCTCGTTCCTCTTCCAGATGAGCAACGTGCAGACGTGGATGAGCGCCGCTCTCACCGACGAGGAGACCTGCACGGACGGATTCCAGGACGTAGCGGAGTGTCCGGTGAAAGCGGATGTATGCAATCGCGTCACCAACGTCAAGAAATTCACCAGCAACGCTTTGGCTCTCGTCAACTCCTACGCCGGCAAGGGAATGCCCTGA 642 0.6386 MRTQRIHLLHLLLSLFLFAAAFSPVAAAAYDASAPAPDDGDTEFIRSSCNTTLYPDVCFTSLSRYANAVQQNPGQLARVAISVSLSKAHRAASYISNLTHDADYGTSGSRAALALHDCFSNLGDAVDEIRGSLKQMRQIGAAGEGAGSFLFQMSNVQTWMSAALTDEETCTDGFQDVAECPVKADVCNRVTNVKKFTSNALALVNSYAGKGMP* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3279 213 SMART PMEI_2 40 203 IPR006501 GO:0004857
Pvu2g3279 213 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 209 - -
Pvu2g3279 213 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 206 IPR035513 -
Pvu2g3279 213 CDD PMEI-like_3 47 209 - -
Pvu2g3279 213 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 207 IPR035513 -
Pvu2g3279 213 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 10 209 - -
Pvu2g3279 213 TIGRFAM PME_inhib: pectinesterase inhibitor domain 11 207 IPR006501 GO:0004857
Pvu2g3279 213 Pfam Plant invertase/pectin methylesterase inhibitor 44 203 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3279 Pvu-Chr2 47891253 47891894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3279 22 210 Carbohydrate Esterase AT5G53370 26.702 1.08e-14 70.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3279 2 47891253 47891894 Pvu2g3279 2 47891253 47891894 ECH