Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1959 ATGAAGAGCAGTGGCTGTAGTGAAGCTTCATCTGGAGAAGGAAACATGAATGTGAAACCTGCATGGCTAGAGAGACTCATGGCTGAGACATTCTTTGGTGCTTGTGGGGTCCACCAGAATCAAAAGAAGAACGAGAAGAACGTCTTTTGCTTGCACTGCTACCTTAGCATCTGCCCCCACTGTCTCCCTTCTCACCCTTCCCATTCCCTTCTCCAGGTGAGAAGGTATGTGTACCATGACGTGGTTCGATTGGGTGATCTAGAAAAGCTCGTCGATTGCTCCAATATTCAGCCATACACCATTAACGGTGCCAAAGTGATATTCTTAAATCAGAGGCCACAGTCAAGGTCATTTAAAGGCACTGTCAACACTTGCTGCACTTGTGACAGGATTCTTCAGGAGCCCTTTCACTTCTGTTCTCTGTCATGCAAGTTTGAGGGTCTAAGAGGTGATTGCTATACCCAATTTGTCCCCACTTCCTCTGAGGCTACCACTAGCATTGCCAACAACAACAACAAGCAGAACACAAATGGCTTCTTCATCTCTCTGGGAAGCAGAAGAAAGGGGGCTCCCCATAGAGCTCCTCTCTCTTAG 594 0.4731 MKSSGCSEASSGEGNMNVKPAWLERLMAETFFGACGVHQNQKKNEKNVFCLHCYLSICPHCLPSHPSHSLLQVRRYVYHDVVRLGDLEKLVDCSNIQPYTINGAKVIFLNQRPQSRSFKGTVNTCCTCDRILQEPFHFCSLSCKFEGLRGDCYTQFVPTSSEATTSIANNNNKQNTNGFFISLGSRRKGAPHRAPLS* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1959 197 Pfam PLATZ transcription factor 74 144 IPR006734 -
Pvu2g1959 197 PANTHER OS02G0172800 PROTEIN 17 146 - -
Pvu2g1959 197 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 17 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1959 Pvu-Chr2 34655211 34658258 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Pvu2g1959 PLATZ 4e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1959 2 34655211 34658258 Pvu2g1959 2 34655211 34658258 ECH