Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1954 ATGGCGCCCACCACCGGAGACCTTCAACTAACTTCTCCCGGCGCCGGCGAACATTCCGACGACCTCGAAGATGTTCGCCTCCTCGATTCCTACGACACACACTACATCCACCACGATGAAACCAAGCGGATTCAGGTCAGAATCACCGGCATGACCTGCGCCGCGTGTTCCAACTCCGTCGAAACCGCTCTCAGGTCCGTTGACGGCGTCACCCACGCTTCCGTCGCTCTTCTTCAAAACAAAGCTGACGTCATTTTCAATCCGAGCCTCGTCAAGGATGACGACATTAAGAATGCGATTGAAGACGCAGGTTTTGAGGCGGAGATCTTGCGGGAGTCCGGTCCGGCGGACCGCGGCGGCGGAGCCGCCGTGGTGGGGCAGTTCACGATCGGCGGGATGACGTGTGCGGCGTGTGTGAATTCCGTTGAGGGCATTTTAAAGAGGCTTAATGGAGTGAAAATAGCGGTGGTGGCTTTGGCTACTTCATTGGGTGAGGTTGAGTATGATCCCAATGTGATTAGCAAAGATGATATTGTGGCGGCCATTGAAGACGCTGGTTTCGAGGGTTCGTTTGTGCAGAGTAATGGGCAGGGCCAGGTTGTGCTGGGGGTTGGTGGTGTGTACTCTCTGGGTGATGCAAAGGTTTTGGAAGGGATGCTCAGTGGCCTCAAGGGGGTGAGGCAGTTTCGGTTTGACCCGGTGTTGAACGAGCTGGATGTGGTGTATGACCTTGAAGTTATTAGTTCGAGGTCATTGGTTGATGGAATCCATCTGGGAAGTAATGGCAAGTTTAGATTGCATGTTAGGAATCCATACGCTAGAATGGCTTCCAAAGATGGTTCGGAAACCTCAAATATGTTTCGGCTTTTTAGTTTCAGCCTGTTTCTCAGTATTCCTCTATTCTTCATTGGGGTAATCTGTCCTCATATTCCGCTGGTCTACTCCTTGTTACTTTGGAGATGTGGCCCCTTTCTCATGGGTGATTGGTTGAAGTGGGCATTGGCAAGTGTCATTCAATTTGTGATTGGGAAACGCTTCTATATAGCGGCCGGAAGAGCTCTAAGAAATGGTTCAACAAACATGGATGTCCTGGTTGCTTTGGGAACTACAGCCTCTTATGTTTATTCCGTTTGTGCTCTTCTTTACGGGGCCCTTACAGGATTTTGGTCTCCAACATACTTTGAAACAAGTGCTATGCTTATAACATTTGTATTGTTTGGCAAGTATTTGGAGTGCCTTGCCAAGGGAAAGACATCTGATGCTATTAAGAAGCTAGTGGAACTTACTCCAGCAACAGCTATATTGGTTGTCAAAGATAAAGGTGGTAAAACTGTTGAAGAAAGGGAAATAGATTCCTTACTCGTTCAACCTGGTGACACATTAAAAGTTCTTCCTGGTACAAAAATTCCTGCTGATGGTATTGTTACTTGGGGCTCAAGTTATGTAAATGAGAGTATGGTGACTGGTGAATCGACACCTCTTTCGAAGGAGGTCAATGCATCTGTTATTGGAGGTACAATTAATTTGCACGGTGCCCTTCATATTCAAGCAACCAAAGTAGGGTCTGATACAATTTTGAGTCAGATAATTAGTTTGGTGGAGACAGCCCAGATGTCCAAAGCTCCCATTCAAAAGTTTGCTGATTATGTAGCAAGCATATTTGTTCCTACGGTTGTGATTTTGTCATTATTGACACTACTGTGCTGGTATATAGCTGGGGCTCTTGGAGTATACCCAGAAAAATGGCTGCCAGAAAATGGAAATCACTTTGTTTTTGCCCTTATGTTTTCAATATCTGTTGTGGTGATTGCATGTCCATGTGCACTTGGTTTGGCAACACCAACTGCTGTCATGGTTGCAACAGGGGTTGGGGCAAACAATGGCGTGTTAATTAAAGGAGGAGACTCCTTGGAAAGGGCTCAGATGGTGAAATATGTCATATTTGATAAAACAGGCACTCTAACTCAGGGGAAATCCAAGGTTACTGCTGCGAAGGTATTCACAGGAATGGATCGCGGAGAATTTCTTACATTGGTGGCTTCTGCTGAGGCTAGCAGTGAACACCCTCTGGGAAAAGCAATATTGCAATATGCCCGCCATTTTCATTTCTTTGATGAGTCTTCTCCTACCTGTGGTACCAAGAATGGTGCTGAGGAGTTCAAGACAGGGTGGCTTTATGATGTCTCAGACTTCTCTGCTCTTCCAGGACGGGGTATCCAGTGCTTTATAGATGGGAAGCGTATTTTGGTTGGTAACCGGAAGCTGCTGGAGGAAAATGGCATAGAGATTTCTACAGAAGTAGAAAATTTTGTTGTAGAGCTTGAAGAAAGTGCAAAGACAGGGATACTGGTAGCGTATGATGATGTATTAACTGGAGCCTTAGGGATTGCAGACCCACTCAAGAGAGAAGCTGCTGTTGTTATAGATGGCCTCCGGAAAATGGGAGTCATACCCGTTATGGTTACTGGAGATAACTGGAGAACAGCTCGAGCTGTTGCCAAGGAGGTTGGCATTGAAGATGTAAGGGCAGAGGTTATGCCTGCCGGAAAGGCTGAGGTTGTCCGTTCATTCCAAAAGGATGGAAGTATGGTTGCAATGGTGGGTGATGGAATCAATGACTCGCCAGCATTAGCTGCTGCAGATGTAGGTATGGCAATTGGGGCAGGGACAGATGTGGCAATAGAAGCTGCTAACTATGTGCTGATGAGAGATAACTTGGAAGATGTGATCACAGCCATTGACCTCTCCAAAAAGACCTTCTTTCGTATTCGATTGAATTATGTATTCGCAATGGCATACAATGTTGTTGCTATACCGGTTGCTGCCGGGGTTTTCTTTCCTTCCTTGAGGATCCAGCTCCCACCATGGGTTGCTGGTGCATGCATGGCTATGTCATCTGTCAGTGTCGTATGCTCTTCTTTGCTTTTGAGAAGATACAAAAAACCCAAACTTACTACAATACTTGAAATAGTTGTAAAGTAA 2982 0.4631 MAPTTGDLQLTSPGAGEHSDDLEDVRLLDSYDTHYIHHDETKRIQVRITGMTCAACSNSVETALRSVDGVTHASVALLQNKADVIFNPSLVKDDDIKNAIEDAGFEAEILRESGPADRGGGAAVVGQFTIGGMTCAACVNSVEGILKRLNGVKIAVVALATSLGEVEYDPNVISKDDIVAAIEDAGFEGSFVQSNGQGQVVLGVGGVYSLGDAKVLEGMLSGLKGVRQFRFDPVLNELDVVYDLEVISSRSLVDGIHLGSNGKFRLHVRNPYARMASKDGSETSNMFRLFSFSLFLSIPLFFIGVICPHIPLVYSLLLWRCGPFLMGDWLKWALASVIQFVIGKRFYIAAGRALRNGSTNMDVLVALGTTASYVYSVCALLYGALTGFWSPTYFETSAMLITFVLFGKYLECLAKGKTSDAIKKLVELTPATAILVVKDKGGKTVEEREIDSLLVQPGDTLKVLPGTKIPADGIVTWGSSYVNESMVTGESTPLSKEVNASVIGGTINLHGALHIQATKVGSDTILSQIISLVETAQMSKAPIQKFADYVASIFVPTVVILSLLTLLCWYIAGALGVYPEKWLPENGNHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDSLERAQMVKYVIFDKTGTLTQGKSKVTAAKVFTGMDRGEFLTLVASAEASSEHPLGKAILQYARHFHFFDESSPTCGTKNGAEEFKTGWLYDVSDFSALPGRGIQCFIDGKRILVGNRKLLEENGIEISTEVENFVVELEESAKTGILVAYDDVLTGALGIADPLKREAAVVIDGLRKMGVIPVMVTGDNWRTARAVAKEVGIEDVRAEVMPAGKAEVVRSFQKDGSMVAMVGDGINDSPALAAADVGMAIGAGTDVAIEAANYVLMRDNLEDVITAIDLSKKTFFRIRLNYVFAMAYNVVAIPVAAGVFFPSLRIQLPPWVAGACMAMSSVSVVCSSLLLRRYKKPKLTTILEIVVK* 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1954 993 CDD HMA 127 188 IPR006121 GO:0046872
Pvu2g1954 993 ProSiteProfiles Heavy-metal-associated domain profile. 125 191 IPR006121 GO:0046872
Pvu2g1954 993 Pfam haloacid dehalogenase-like hydrolase 643 881 - -
Pvu2g1954 993 ProSiteProfiles Heavy-metal-associated domain profile. 43 109 IPR006121 GO:0046872
Pvu2g1954 993 ProSitePatterns Heavy-metal-associated domain. 48 78 IPR017969 GO:0046872
Pvu2g1954 993 SUPERFAMILY HAD-like 646 973 IPR036412 -
Pvu2g1954 993 SFLD p-type atpase 629 918 IPR044492 -
Pvu2g1954 993 SUPERFAMILY HMA, heavy metal-associated domain 127 195 IPR036163 GO:0046872
Pvu2g1954 993 Gene3D - 126 191 - -
Pvu2g1954 993 Gene3D - 38 109 - -
Pvu2g1954 993 SFLD C1.7: P-type atpase like 629 918 - -
Pvu2g1954 993 PANTHER ATP7, ISOFORM B 3 986 - -
Pvu2g1954 993 SUPERFAMILY HMA, heavy metal-associated domain 36 111 IPR036163 GO:0046872
Pvu2g1954 993 SUPERFAMILY Calcium ATPase, transduction domain A 447 533 IPR008250 -
Pvu2g1954 993 PRINTS Copper-transporting ATPase 1 signature 43 68 - -
Pvu2g1954 993 PRINTS Copper-transporting ATPase 1 signature 69 92 - -
Pvu2g1954 993 PRINTS Copper-transporting ATPase 1 signature 98 118 - -
Pvu2g1954 993 Gene3D - 638 917 IPR023214 -
Pvu2g1954 993 ProSitePatterns E1-E2 ATPases phosphorylation site. 649 655 IPR018303 -
Pvu2g1954 993 PRINTS P-type cation-transporting ATPase superfamily signature 483 497 - -
Pvu2g1954 993 PRINTS P-type cation-transporting ATPase superfamily signature 647 661 - -
Pvu2g1954 993 PRINTS P-type cation-transporting ATPase superfamily signature 792 803 - -
Pvu2g1954 993 PRINTS P-type cation-transporting ATPase superfamily signature 814 824 - -
Pvu2g1954 993 PRINTS P-type cation-transporting ATPase superfamily signature 867 886 - -
Pvu2g1954 993 PRINTS P-type cation-transporting ATPase superfamily signature 890 902 - -
Pvu2g1954 993 Gene3D - 658 800 IPR023299 GO:0000166
Pvu2g1954 993 MobiDBLite consensus disorder prediction 1 20 - -
Pvu2g1954 993 TIGRFAM TIGR00003: copper ion binding protein 44 107 IPR006122 GO:0005507
Pvu2g1954 993 TIGRFAM TIGR00003: copper ion binding protein 127 188 IPR006122 GO:0005507
Pvu2g1954 993 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 746 951 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu2g1954 993 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 400 668 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu2g1954 993 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 361 976 IPR027256 GO:0006812|GO:0016021|GO:0019829
Pvu2g1954 993 CDD HMA 45 108 IPR006121 GO:0046872
Pvu2g1954 993 Pfam E1-E2 ATPase 430 626 - -
Pvu2g1954 993 PANTHER HEAVY METAL P-TYPE ATPASE 3 986 - -
Pvu2g1954 993 Gene3D - 415 537 - -
Pvu2g1954 993 SUPERFAMILY Calcium ATPase, transmembrane domain M 381 942 IPR023298 -
Pvu2g1954 993 ProSitePatterns Heavy-metal-associated domain. 130 159 IPR017969 GO:0046872
Pvu2g1954 993 Pfam Heavy-metal-associated domain 46 106 IPR006121 GO:0046872
Pvu2g1954 993 Pfam Heavy-metal-associated domain 128 188 IPR006121 GO:0046872
Pvu2g1954 993 CDD P-type_ATPase_Cu-like 288 964 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1954 Pvu-Chr2 34600086 34606020 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1954 2 34600086 34606020 Pvu2g1954 2 34600086 34606020 ECH