Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1940 ATGAGATTCTTAGCGGTGTGTTCTGTCTTCTTATTGCTGCTGCTACAACTAGAAGACACCACATGTTTCACTTTCAGCAGGGAGAAAAAGCTGTCAGCATTCTGGACCAAGCTTGATAGAAAGATTCAAAATTTTGCTACAACTCCTTTGGCATCACCAGTTGCTTCACCAGAAACACATAGGAAAGGGAGAGTGTTGTACGTGACTGAGTATGGTGCGGATCCAAGTGGGAATGAAGAGAGTAGTGATGCCATTTTGAAAGCAGTGGAAGATGCTTTTGGTTTGCAGAAGGGTTATGAGATGGATGCAGGAGTGGATGAGCTTGGAGGGGTTGTGATTGATTTGGAAGGTGGAAACTACAAAATCAGCAAACCCATTACATTCCCTTCTGGTACTGGCAATGTTGTGGTAAAAGAAGGAACGTTGAGAGCATCTGATGAATTTCCTGGTGATCGACATCTTGTCGAGTTATGGTCATCAAAGTCTGATCAAAATGGCAATGGTGGAATTTACTATGAAGACATAACTTTCAGGGACGTTCTCTTTGATTCAAGCTATAGAGGAGGAGGTTTATTCATTGTTGATTCGGCTAGAATCCGGATCAACGATTGCTTCTTCCTTCACTTCACCACACAAGGAATTCTGGTCAACAAAGGACACGAGATCTACATCACAAGCTGCTTTCTTGGGCAACACTCAACCGTGGGTGGAGACAAAGGTGAGAGGAACTTCTCAGGGGTGGCCATTGATCTTGCTAGTAATGATAATGCAATCACAGATGTTGTGGTTTTCTCAGCGGCCATTGGTGTTGTTCTAAGGGGTCAAGCTAACATTCTAACAGGGGTGCATTGTTATAATAAGGCAACAGGTTTTGGTGGCATAGGGATATTAGTGAAATTGCCTGGTAATTCTCTGACTAGAATTGACAACTGTTACATGGATTACACTGGAATAGTCATGGAAGATCCTGTTCAAGTTCATGTCACAAATGGGTTATTTCTAGGGGATGCTAATATTGTATTGAAGTCTATAGAAGGTAGGATTTTTGGCCTAAATATAATGAACAACATGTTCAGTGGTGATCCCTCAAGGAAGGTTCCTATTGTAAGTCTGGATGGGGAATTCAGTAGCATTGATCAAGTGGTGGTTGATGGCAACAATGCCAATGGCATGAGCTTGAGATCAACCGTTGGGAAGTTAACTGCCAGTGGAAATGGCACAAAGTGGGTGGCTGATTTTTCATCGGTTTTGGTGTTTCCTAATAGAATCAGTCATTTTCAATATTCATTTTATGCTCAAGATGAACCTAAATTTGTAACATTTTCTGTGACCAATATGTCAGATAACGTTGTTGTTATGGAGAGTGAGAAAGAAGCCAAGGGGTTTGTCTCCTTCACAGTTGAACAATAA 1410 0.4163 MRFLAVCSVFLLLLLQLEDTTCFTFSREKKLSAFWTKLDRKIQNFATTPLASPVASPETHRKGRVLYVTEYGADPSGNEESSDAILKAVEDAFGLQKGYEMDAGVDELGGVVIDLEGGNYKISKPITFPSGTGNVVVKEGTLRASDEFPGDRHLVELWSSKSDQNGNGGIYYEDITFRDVLFDSSYRGGGLFIVDSARIRINDCFFLHFTTQGILVNKGHEIYITSCFLGQHSTVGGDKGERNFSGVAIDLASNDNAITDVVVFSAAIGVVLRGQANILTGVHCYNKATGFGGIGILVKLPGNSLTRIDNCYMDYTGIVMEDPVQVHVTNGLFLGDANIVLKSIEGRIFGLNIMNNMFSGDPSRKVPIVSLDGEFSSIDQVVVDGNNANGMSLRSTVGKLTASGNGTKWVADFSSVLVFPNRISHFQYSFYAQDEPKFVTFSVTNMSDNVVVMESEKEAKGFVSFTVEQ* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1940 469 PANTHER POLYGALACTURONASE QRT3 1 469 IPR039279 GO:0004650
Pvu2g1940 469 SUPERFAMILY Pectin lyase-like 64 395 IPR011050 -
Pvu2g1940 469 Gene3D - 67 463 IPR012334 -
Pvu2g1940 469 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 1 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1940 Pvu-Chr2 34401266 34404115 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1940 2 34401266 34404115 Pvu2g1940 2 34401266 34404115 ECH