Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1936 ATGGAAGGTTTTCACCCTTCTATGACGTCTCCTTTTTCGTACACATTCCCCATCAGTGGTGCTGGTAGTAGTACTAATACTAGCAATCTTACCAGTGCCACTTACAGCACTTCTACTCTATGGATGAACAGCAGAATATGGAGCAAGCTCCCTCAGAGGCTTCTGGAGCGTGTCATAGCCTTCCTTCCTCCACCAGCTTTCTTTCGTGCACGTTGTGTTTGCAAGAGATGGTATGCCCTTCTCTTCTCCAACACCTTCCTTGAATTATATCTCCAAGTCTCTCCACACCGCCACTGGTTCATGTTCTTCAAGCACCACAAAACTCGCAAGAGCTACATCTACAAGAACAGCAACAACGGTAGCGGCTGTGGTTCCTGTGAAGAAGGGTACCTCTTTGATCCCTCTGACATGGCATGGTACCGCATTTCCTTTGCTATAGTCCCTTCTGGCTTCTCTCCAGCCTCATCTTCAGCTGGTTTACTTTGTTGGGTTTCTGATGAGGCTGGTCCCAAGACCATGCTTCTGTGCAACCCTTTGGTTGGTTCTCTCACTCAGTTACCTCCCACCTTGAGACCTAGACTCTTCCCTTCCATTGGCCTAACCATCAGCCCCACCTGCATAGATGTCACTGTCGCCGGGGATGACATGATATCTCCTTATGCAGTGAAGAACTTGACATCTGAAAGCTTTCACATCGATGGAGGAGGGTTTTACTCCTTGTGGGGCACTACCTCTTCTCTGCCTAGGCTTTGCAGCCTTGAATCCGGTCGAATGGTTTACGCTGAAGGCAAGTTTTACTGCATGAATTGTAGCCCTTTCAGTGTGCTGGCTTATGACATCACATCAAACAATTGGTTCAAAATACAAGCCCCCATGAGGAGGTTCCTCAGGTCTCCCAACCTCGTTGAGTGCAAGGGGAAGCTGCTTCTTGTTGCGGCTGTTGAGAAGAGCAAGCTGAACGTGCCAAAGAGTTTGAGGGTGTGGAGTTTGCAGGCTTGTGGGACAATGTGGGTGGAGTCTGAGAGAATGCCGCAGCAGCTTTATATTCAGTTTGCTGAATTGGAAGTTGGAAACGGGTTTGAATGTGTAGGGCATGGGGAGTTTATTGTGATCATGATTCGTGGAACAGACAAAGCGTTGCTGTTTGATATTTGCAGGAAGAGGTGGCAGTGGATTCCACCTTGTCCTTACATTGCACATGATGGCTTTGAATTGCATGGTTTTGCATATGAACCTAGACTCGCCACTCCAGTCACTACCCTCCTTGATCAATTGGCACTTCCCTTCCAGACTTTTACTGCTTAA 1305 0.4797 MEGFHPSMTSPFSYTFPISGAGSSTNTSNLTSATYSTSTLWMNSRIWSKLPQRLLERVIAFLPPPAFFRARCVCKRWYALLFSNTFLELYLQVSPHRHWFMFFKHHKTRKSYIYKNSNNGSGCGSCEEGYLFDPSDMAWYRISFAIVPSGFSPASSSAGLLCWVSDEAGPKTMLLCNPLVGSLTQLPPTLRPRLFPSIGLTISPTCIDVTVAGDDMISPYAVKNLTSESFHIDGGGFYSLWGTTSSLPRLCSLESGRMVYAEGKFYCMNCSPFSVLAYDITSNNWFKIQAPMRRFLRSPNLVECKGKLLLVAAVEKSKLNVPKSLRVWSLQACGTMWVESERMPQQLYIQFAELEVGNGFECVGHGEFIVIMIRGTDKALLFDICRKRWQWIPPCPYIAHDGFELHGFAYEPRLATPVTTLLDQLALPFQTFTA* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1936 434 Pfam F-box domain 47 81 IPR001810 GO:0005515
Pvu2g1936 434 SUPERFAMILY Galactose oxidase, central domain 71 397 IPR011043 -
Pvu2g1936 434 PANTHER F-BOX/KELCH-REPEAT PROTEIN 47 415 - -
Pvu2g1936 434 Coils Coil 434 434 - -
Pvu2g1936 434 SUPERFAMILY F-box domain 45 142 IPR036047 GO:0005515
Pvu2g1936 434 PANTHER PROTEIN UNUSUAL FLORAL ORGANS 47 415 - -
Pvu2g1936 434 Gene3D - 42 87 - -
Pvu2g1936 434 SMART fbox_2 50 90 IPR001810 GO:0005515
Pvu2g1936 434 ProSiteProfiles F-box domain profile. 44 93 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1936 Pvu-Chr2 34357705 34359009 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1936 2 34357705 34359009 Pvu2g1936 2 34357705 34359009 ECH