Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1910 ATGGTTTTTCCAAAACCTTCTTCTGAATCTGATCTCTTTCTTCATTCCAACTTCGCCTCTTCTTATGACGGAGACTCTCTTCCCAGGTTCAGCATGCCCGAGAACTCCATGCCTAAAGATGCTGCTTACCAAAACATACACGACGAGTTGCAGCTTGATGCTATTCCAAAGCTTAACTTGGCTTCCTTTGTCACCACTTCCATGGAGGAAGAGTGCAACAAGCTCATCATGGAATCTATCAACAAGAACTATGTAGACATGGATGAGTATCCTGCAACCACTGACCTTCATAACCGGTGTGTGAACATGATAGCACGTTTGTTCCATGCTGAACTTGGAGAAAATGAGAATGCTGTTGGAGCAGGAACTGTGGGATCATCAGAGGCCATAATGCTAGCAGGACTTGCATTCAAGAAGAAGTGGATGAACAGGCGCAAGGCAGAGGGCAAGCCTTATGATAAGCCTAATTTGGTTACTGGTTCCAATGTGCAAGTATGTTGGGAGAAATTTGCCAGGTATTTTGAAGTGGAGTTGAGGGAAGTGGAGGTGAGAGAAGGCTACTACGTGATGGACCCTGCCAAAGCTGTTGAGCTGGTTGATGAGAACACTATTTGTGTGGCTGCCATCTTGGGTTCAACTTACAATGGAGAGTTTGAAGATGTGAAACTCTTAAACGACTTGCTGCTACAAAAGAATAAGCAAACTGGATGGGAAACAGGTATTCATGTGGATGCTGCTAGTGGTGGTTTCGTTGCTCCTTTCCTTTATCCAGAGCTTGAATGGGATTTCAGACTGGAATTGGTGAAGAGCATAAACGTGAGTGGACACAAGTATGGGCTTGTTTATGCTGGTATTGGTTGGGTTATTTGGAGGAACAAGGAGGAGTTGCCCCAAGACCTTATCTTCCATATCAATTACCTTGGAGCTCACCAACCCACCTTCACCCTCAATTTCTCTAAAGGTTCTAGTCAGATCATTGCTCAATATTATCAGCTGATTCGTCTTGGCCAAGAGGGTTACCGAAGCATAATGGAGAAGTGCAGAGAAAATGCAAAGGTGGTGAAAGAAAATTTGGAGAAGAGTGGACGCTTTAACATAGTTTCAAAAGACAATGGTGTTCCTGTGGTGGCATTTTCTCTGAAAGACCGAAGACAGTACGATGAGTACAAGATATCAGAGATGCTGCGGCGCCATGGTTGGATTGTTCCAGCCTATCCTATGCCACCTGCTGCTCAGCACATAAATGTACTCCGTGTGGTCATAAGGGCTGAGTTTTCACGCACCCTTGCTCAACGCCTTGTTTTTGACATACACAATGTGCTGCATGAGCTTGAAAAGGTGCATGTTCCGAAAGTGATGAACAACATTACGGAAGAGAAGAAGGATGTGGTTGAGAGCGGGGTTAAGAAAAGTGCGTTGGATGCACAGAGGGAAATCATTGGTCAAGAGTCCAACAAGCGTCAGAAAATCATGGCTGTGTAG 1482 0.4487 MVFPKPSSESDLFLHSNFASSYDGDSLPRFSMPENSMPKDAAYQNIHDELQLDAIPKLNLASFVTTSMEEECNKLIMESINKNYVDMDEYPATTDLHNRCVNMIARLFHAELGENENAVGAGTVGSSEAIMLAGLAFKKKWMNRRKAEGKPYDKPNLVTGSNVQVCWEKFARYFEVELREVEVREGYYVMDPAKAVELVDENTICVAAILGSTYNGEFEDVKLLNDLLLQKNKQTGWETGIHVDAASGGFVAPFLYPELEWDFRLELVKSINVSGHKYGLVYAGIGWVIWRNKEELPQDLIFHINYLGAHQPTFTLNFSKGSSQIIAQYYQLIRLGQEGYRSIMEKCRENAKVVKENLEKSGRFNIVSKDNGVPVVAFSLKDRRQYDEYKISEMLRRHGWIVPAYPMPPAAQHINVLRVVIRAEFSRTLAQRLVFDIHNVLHELEKVHVPKVMNNITEEKKDVVESGVKKSALDAQREIIGQESNKRQKIMAV* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1910 493 Gene3D - 361 447 - -
Pvu2g1910 493 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 17 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Pvu2g1910 493 Gene3D - 1 65 - -
Pvu2g1910 493 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pvu2g1910 493 PANTHER GLUTAMATE DECARBOXYLASE 1 492 IPR010107 GO:0004351|GO:0006536|GO:0030170
Pvu2g1910 493 SUPERFAMILY PLP-dependent transferases 19 446 IPR015424 -
Pvu2g1910 493 PANTHER GLUTAMATE DECARBOXYLASE 1 492 - -
Pvu2g1910 493 CDD DOPA_deC_like 59 437 - -
Pvu2g1910 493 Gene3D - 66 360 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1910 Pvu-Chr2 34088818 34090976 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1910 1 480 Calmodulin-binding Proteins AT5G17330 74.227 0.0 749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1910 2 34088818 34090976 Pvu2g1910 2 34088818 34090976 ECH