Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1734 ATGGAGGAGAGGAAGTATGTGTGCAAGTATTGCAGCAAGAGGTTTCCTTGTGGGAAGTCTCTGGGGGGTCACATCAGGACCCATATGACTGAAGAAAGAAGTAATGCTGATGCTGACATGTTCATCAAGTCGGATGGTGTGAAGAAGAAGAGAGATTTATGGTGCGAAGATGTTGTTGGGAACCCCATTTATGGCCTCAGAGAGAACCCCAAGAAAACAATGAGGTTTGTGCATTCTGGTGGTGGTGCCGCTGCTGCCGGTGCCAACTATGAAAAGGAGGAGAGGTTCTGCAAAGAATGCGGGAAAGGTTTCCCATCGCTGAAGGCTCTCTGTGGTCACATGGCTTGTCACTCCGATAAAGAGAAGAGAACCATCAAGTTTGAAGACAGTGACAAGAAACTGAAATTGGTTATGGATAGTCAATCTGACACCGAGACTTGTGCTCCATCTCATCCAAGGAGATCCAAGAGAACCAGGGTGAAGACCATTAACCTTTCCAATCACCCTTTTTCTTCTTCTTCTCCTTCTTCTTCTTCTGTTGTTCCGTTGGCCAATGGCTCTTCACCCGTGTCAGAGGTGGAGCAGGAGCAAGAAGAGGTTGCTAGGTGCTTGATGCTGCTGTCTAGAGATTCTAGCTTCAAGGGTCGTTTTGCTTCGGTTACAGAATTTTCTGATAACAACTCAGTCATTCTAGAAGCAAAATCATCCTCTCCTGACACCCGGCTTGGTGTCAGCAATGGTTCTAGATATTTCAAACATGGTCCCAAAGCCAAAATGGTAGACTCAGATGTCTCAAATGATGAATTTAAGTGGCCCAAAGTGGGAGATAAGTCCAGCAAATACACTGCAACTTTAGTAAAGAAATTAGCGATGGAGGATTTGGATTATGATAGAACAGATGGAACTGCAAGGAAGTTTGATTCAAGAAAGAGAAGCAACTACGATTCTCTTTATCACAATCCAGTTGGCGGTTCTAGCAAGATAGCAAATGGTTTTGGTAATGAAGTATGTGGGAATGGCACAAAAGGTTGGAAGTATGAGTTGGAGGGTGAAAGGGACTATGATTCTTATGATTCCATAGAGGAGAGCCATGAAAACAGTTCAGAGACTGAATCGTATCCTGCTCCCAGGTCTCACAACAGCAAGGCTCTCAATGGAAAGAAGTCCACCAGCAAGGCAAAGAAGAAGCTGAAGTCTAAGAAAAGCAGGGATCATGAGTGTCCAATCTGCTACAAAATTTTCAGGTCAGGCCAAGCCTTGGGAGGTCACAAAAGATCACATTTCATTGGAGGTTCCGAGGAGAACACTCTGGTGATCAAACAAGCTGCTCCTGTTGTTCCATGCCTGATTGATCTCAATCTACCTGCTCCTGTTGATGAATAG 1383 0.4483 MEERKYVCKYCSKRFPCGKSLGGHIRTHMTEERSNADADMFIKSDGVKKKRDLWCEDVVGNPIYGLRENPKKTMRFVHSGGGAAAAGANYEKEERFCKECGKGFPSLKALCGHMACHSDKEKRTIKFEDSDKKLKLVMDSQSDTETCAPSHPRRSKRTRVKTINLSNHPFSSSSPSSSSVVPLANGSSPVSEVEQEQEEVARCLMLLSRDSSFKGRFASVTEFSDNNSVILEAKSSSPDTRLGVSNGSRYFKHGPKAKMVDSDVSNDEFKWPKVGDKSSKYTATLVKKLAMEDLDYDRTDGTARKFDSRKRSNYDSLYHNPVGGSSKIANGFGNEVCGNGTKGWKYELEGERDYDSYDSIEESHENSSETESYPAPRSHNSKALNGKKSTSKAKKKLKSKKSRDHECPICYKIFRSGQALGGHKRSHFIGGSEENTLVIKQAAPVVPCLIDLNLPAPVDE* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1734 460 MobiDBLite consensus disorder prediction 369 387 - -
Pvu2g1734 460 ProSitePatterns Zinc finger C2H2 type domain signature. 97 117 IPR013087 -
Pvu2g1734 460 SUPERFAMILY beta-beta-alpha zinc fingers 2 32 IPR036236 -
Pvu2g1734 460 ProSiteProfiles Zinc finger C2H2 type domain profile. 6 33 IPR013087 -
Pvu2g1734 460 MobiDBLite consensus disorder prediction 162 187 - -
Pvu2g1734 460 SUPERFAMILY beta-beta-alpha zinc fingers 96 427 IPR036236 -
Pvu2g1734 460 MobiDBLite consensus disorder prediction 358 401 - -
Pvu2g1734 460 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 460 - -
Pvu2g1734 460 ProSiteProfiles Zinc finger C2H2 type domain profile. 405 427 IPR013087 -
Pvu2g1734 460 MobiDBLite consensus disorder prediction 139 187 - -
Pvu2g1734 460 Pfam C2H2-type zinc finger 405 427 - -
Pvu2g1734 460 Pfam C2H2-type zinc finger 97 119 - -
Pvu2g1734 460 Pfam C2H2-type zinc finger 6 30 - -
Pvu2g1734 460 ProSiteProfiles Zinc finger C2H2 type domain profile. 95 122 IPR013087 -
Pvu2g1734 460 ProSitePatterns Zinc finger C2H2 type domain signature. 8 28 IPR013087 -
Pvu2g1734 460 Gene3D Classic Zinc Finger 1 54 - -
Pvu2g1734 460 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 460 - -
Pvu2g1734 460 SMART c2h2final6 6 28 IPR013087 -
Pvu2g1734 460 SMART c2h2final6 95 117 IPR013087 -
Pvu2g1734 460 SMART c2h2final6 405 427 IPR013087 -
Pvu2g1734 460 ProSitePatterns Zinc finger C2H2 type domain signature. 407 427 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1734 Pvu-Chr2 31119036 31122808 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pvu2g1734 zf-C2H2_6 4.8e-07 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1734 2 31119036 31122808 Pvu2g1734 2 31119036 31122808 ECH